- Proteogenomics: concepts, applications and computational strategies
Alexey I Nesvizhskii - 2014 - Proteogenomics from a bioinformatics angle - A growing field
Gerben Menschaert and David Fen - 2015 - Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic Variation
Gloria M. Sheynkman, Michael R. Shortreed, Anthony J. Cesnik, and Lloyd M. Smith - Proteogenomics
Santosh Renuse, Raghothama Chaerkady and Akhilesh Pandey - 2011 - Proteogenomics in the Context of the Human Proteome Project (HPP)
José González-Gomariz, Elizabeth Guruceaga, Macarena López-Sánchez & Victor Segura - 2019 - Methods, Tools and Current Perspectives in Proteogenomics
Kelly V. Ruggles, Karsten Krug, Xiaojing Wang, Karl R. Clauser, Jing Wang, Samuel H. Payne, David Fenyö, Bing Zhang, and D. R. Mani - 2017 - Proteogenomic Database Construction Driven from Large Scale RNA-seq Data
Sunghee Woo, Seong Won Cha, Gennifer Merrihew, Yupeng He, Natalie Castellana, Clark Guest, Michael MacCoss, and Vineet Bafna - 2013 - Proteogenomic mapping as a complementary method to perform genome annotation
Jacob D. Jaffe, Howard C. Berg and George M. Church - 2004 - Proteogenomic Tools and Approaches to Explore Protein Coding Landscapes of Eukaryotic Genomes
Dhirendra Kumar and Debasis Dash - 2016 - Template Proteogenomics: Sequencing Whole Proteins Using an Imperfect Database
Natalie E. Castellana, Victoria Pham, David Arnott, Jennie R. Lill, and Vineet Bafna - 2010 - Peptide Identification by Searching Large-Scale Tandem Mass Spectra against Large Databases: Bioinformatics Methods in Proteogenomics
Mohamed Helmy, Masaru Tomita, and Yasushi Ishihama - 2012 - Addressing Statistical Biases in Nucleotide-Derived Protein Databases for Proteogenomic Search Strategies
Paul Blakeley, Ian M. Overton, and Simon J. Hubbard - 2012 - A note on the false discovery rate of novel peptides in proteogenomics
Kun Zhang, Yan Fu, Wen-Feng Zeng, Kun He, Hao Chi, Chao Liu, Yan-Chang Li, Yuan Gao, Ping Xu, and Si-Min He - 2015 - Using Proteomics Bioinformatics Tools and Resources in Proteogenomic Studies
Marc Vaudel, Harald Barsnes, Helge Ræder, and Frode S. Berven - 2016