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setup.py
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setup.py
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from setuptools import setup, Extension
dnautils = Extension('dnautils', sources=['lib/dnautils.c'],
extra_compile_args=['-std=c99'])
setup(
name='ImmuneDB',
version='0.19.1',
author='Aaron M. Rosenfeld',
author_email='ar374@drexel.edu',
url='https://github.com/arosenfeld/immunedb',
packages=[
'immunedb',
'immunedb.aggregation',
'immunedb.api',
'immunedb.common',
'immunedb.exporting',
'immunedb.identification',
'immunedb.importing',
'immunedb.trees',
'immunedb.util',
],
scripts=[
'bin/immunedb_admin',
'bin/immunedb_clones',
'bin/immunedb_clone_import',
'bin/immunedb_clone_stats',
'bin/immunedb_clone_pressure',
'bin/immunedb_clone_trees',
'bin/immunedb_collapse',
'bin/immunedb_local_align',
'bin/immunedb_identify',
'bin/immunedb_import',
'bin/immunedb_rest',
'bin/immunedb_sample_stats',
'bin/immunedb_sql',
],
install_requires=[
'gevent',
'sqlalchemy',
'biopython',
'bottle',
'ete2',
'numpy',
'PyMySQL',
],
ext_modules=[dnautils],
license='LICENSE.txt',
description='A module for efficient storage and analysis of '
'high-throughput B-cell sequence data.',
classifiers=[
'Development Status :: 4 - Beta',
'Environment :: Console',
'Intended Audience :: Science/Research',
'Natural Language :: English',
'Programming Language :: Python :: 2.7',
'Topic :: Scientific/Engineering :: Bio-Informatics'
]
)