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installing source package ‘Rssa’ ...
** package ‘Rssa’ successfully unpacked and MD5 sums checked
checking for gcc... gcc -std=gnu99
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc -std=gnu99 accepts -g... yes
checking for gcc -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -std=gnu99 -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking fftw3.h usability... yes
checking fftw3.h presence... yes
checking for fftw3.h... yes
checking for fftw_execute in -lfftw3... yes
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating R/init.R
config.status: creating src/config.h
** libs
gcc -std=gnu99 -I/home/geodesy/software/rbase/R-3.1.3/include -DNDEBUG -I/usr/local/include -I. -I. -fpic -g -O2 -c extmat.c -o extmat.o
gcc -std=gnu99 -I/home/geodesy/software/rbase/R-3.1.3/include -DNDEBUG -I/usr/local/include -I. -I. -fpic -g -O2 -c hankel.c -o hankel.o
gcc -std=gnu99 -I/home/geodesy/software/rbase/R-3.1.3/include -DNDEBUG -I/usr/local/include -I. -I. -fpic -g -O2 -c hbhankel.c -o hbhankel.o
gcc -std=gnu99 -I/home/geodesy/software/rbase/R-3.1.3/include -DNDEBUG -I/usr/local/include -I. -I. -fpic -g -O2 -c masks.c -o masks.o
gcc -std=gnu99 -I/home/geodesy/software/rbase/R-3.1.3/include -DNDEBUG -I/usr/local/include -I. -I. -fpic -g -O2 -c toeplitz.c -o toeplitz.o
gcc -std=gnu99 -shared -L/home/geodesy/software/rbase/R-3.1.3/lib -L/usr/local/lib -o Rssa.so extmat.o hankel.o hbhankel.o masks.o toeplitz.o -lfftw3 -L/home/geodesy/software/rbase/R-3.1.3/lib -lR
/usr/bin/ld: /usr/local/lib/libfftw3.a(mapflags.o): relocation R_X86_64_32 against `.rodata' can not be used when making a shared object; recompile with -fPIC
/usr/local/lib/libfftw3.a: error adding symbols: Bad value
collect2: error: ld returned 1 exit status
make: *** [Rssa.so] Error 1
ERROR: compilation failed for package ‘Rssa’
removing ‘/home/geodesy/software/rbase/R-3.1.3/library/Rssa’
Warning in install.packages :
installation of package ‘Rssa’ had non-zero exit status
The downloaded source packages are in
‘/tmp/Rtmp1ptmKz/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
The text was updated successfully, but these errors were encountered:
Hi,
Would you please guide me how to solve this problem?
best regards,
Mohammad Mohseni Aref
100K .......... .......... .......... .......... .......... 14% 10.8M 3s
150K .......... .......... .......... .......... .......... 19% 299K 3s
200K .......... .......... .......... .......... .......... 24% 8.95M 2s
250K .......... .......... .......... .......... .......... 29% 11.1M 2s
300K .......... .......... .......... .......... .......... 34% 11.8M 1s
350K .......... .......... .......... .......... .......... 39% 318K 1s
400K .......... .......... .......... .......... .......... 44% 10.4M 1s
450K .......... .......... .......... .......... .......... 49% 10.6M 1s
500K .......... .......... .......... .......... .......... 54% 10.2M 1s
550K .......... .......... .......... .......... .......... 59% 11.6M 1s
600K .......... .......... .......... .......... .......... 64% 9.86M 0s
650K .......... .......... .......... .......... .......... 69% 11.6M 0s
700K .......... .......... .......... .......... .......... 74% 354K 0s
750K .......... .......... .......... .......... .......... 79% 11.1M 0s
800K .......... .......... .......... .......... .......... 84% 9.93M 0s
850K .......... .......... .......... .......... .......... 89% 10.5M 0s
900K .......... .......... .......... .......... .......... 94% 11.7M 0s
950K .......... .......... .......... .......... .......... 99% 11.1M 0s
1000K ......... 100% 12.4M=1.0s
2016-07-13 18:57:55 (962 KB/s) - ‘/tmp/Rtmp1ptmKz/downloaded_packages/Rssa_0.13-1.tar.gz’ saved [1033571/1033571]
** package ‘Rssa’ successfully unpacked and MD5 sums checked
checking for gcc... gcc -std=gnu99
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc -std=gnu99 accepts -g... yes
checking for gcc -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -std=gnu99 -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking fftw3.h usability... yes
checking fftw3.h presence... yes
checking for fftw3.h... yes
checking for fftw_execute in -lfftw3... yes
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating R/init.R
config.status: creating src/config.h
** libs
gcc -std=gnu99 -I/home/geodesy/software/rbase/R-3.1.3/include -DNDEBUG -I/usr/local/include -I. -I. -fpic -g -O2 -c extmat.c -o extmat.o
gcc -std=gnu99 -I/home/geodesy/software/rbase/R-3.1.3/include -DNDEBUG -I/usr/local/include -I. -I. -fpic -g -O2 -c hankel.c -o hankel.o
gcc -std=gnu99 -I/home/geodesy/software/rbase/R-3.1.3/include -DNDEBUG -I/usr/local/include -I. -I. -fpic -g -O2 -c hbhankel.c -o hbhankel.o
gcc -std=gnu99 -I/home/geodesy/software/rbase/R-3.1.3/include -DNDEBUG -I/usr/local/include -I. -I. -fpic -g -O2 -c masks.c -o masks.o
gcc -std=gnu99 -I/home/geodesy/software/rbase/R-3.1.3/include -DNDEBUG -I/usr/local/include -I. -I. -fpic -g -O2 -c toeplitz.c -o toeplitz.o
gcc -std=gnu99 -shared -L/home/geodesy/software/rbase/R-3.1.3/lib -L/usr/local/lib -o Rssa.so extmat.o hankel.o hbhankel.o masks.o toeplitz.o -lfftw3 -L/home/geodesy/software/rbase/R-3.1.3/lib -lR
/usr/bin/ld: /usr/local/lib/libfftw3.a(mapflags.o): relocation R_X86_64_32 against `.rodata' can not be used when making a shared object; recompile with -fPIC
/usr/local/lib/libfftw3.a: error adding symbols: Bad value
collect2: error: ld returned 1 exit status
make: *** [Rssa.so] Error 1
ERROR: compilation failed for package ‘Rssa’
Warning in install.packages :
installation of package ‘Rssa’ had non-zero exit status
The downloaded source packages are in
‘/tmp/Rtmp1ptmKz/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
The text was updated successfully, but these errors were encountered: