Skip to content

Latest commit

 

History

History
90 lines (78 loc) · 3.28 KB

NEWS.md

File metadata and controls

90 lines (78 loc) · 3.28 KB
Raw

Release Notes Version 0.3

  • [0.3.0]
    • released 2024-05-17
    • code and documentation refresh...
    • added as.respeciate method; replacing related unexported code
    • sp_profile, sp_build_rsp_x updates; both now use as.respeciate
    • sp_profile to rsp_profile; sp_dcast/melt to rsp_dcast/melt; both as part of object class rebuild
    • sp_pad to rsp_pad; sp_rescale to rsp_rescale; class rebuild
    • sp_match_profile to rsp_match_profile; class rebuild
    • sp_cor to rsp_cor; sp_distance to rsp_dist; class rebuild
    • rsp_plots now track factors
    • pls_plots updated for object class

Release Notes Version 0.2

  • [0.2.7]

    • released 2024-02-17
    • sp_plot_species update; species order forced, added reset.x
    • sp_match_profile update; fit methods for pd and sid (Belis)
    • sp_match_profile update; added sid variations
    • pls_plot patch; forcing profile order 1

  • [0.2.6]

    • released 2023-12-01
    • sp_build_rsp_x update; added further value handling
    • summary.respeciate update; removed output print
    • pls_rebuild update; option to add species as marker
    • now importing lattice and latticeExtra for plot paneling
    • pls_plots and plot.respeciate now using lattice/latticeExtra
    • added sp_plot_profile and sp_profile_species
    • reduced padding on log scale y-axis

  • [0.2.5]

    • released 2023-10-25
    • sp_build_rsp_x update; x converted to data.frame (trouble with tibbles!)
    • pls_plot update; changed mar settings
    • added first draft pls_test

  • [0.2.4]

    • released 2023-10-14
    • added functions: pls_fit_species
    • added draft rsp_pls and rsp_x object classes
    • added draft sp_build_rsp_x
    • moved from importing data.table to data.table::as.data.table, etc...

  • [0.2.3]

    • released 2023-09-26
    • added functions: sp_rescale_species, sp_dcast, sp_dcast_species sp_pad, sp_pls_profile
    • added draft spq_ quick profile build functions
    • added pls_ functions for sp_pls_profile outputs
    • sp_profile update: references not included by default
    • sp_match: changed n to matches; added min.n (so more consistent with other functions); now averages x
    • sp_species_cor: added heatmap and key list options

  • [0.2.2]

    • released 2023-08-24
    • now imports data.table; moving to data.table methods for speed
    • changed news format because build_news missing previous md text
    • added functions: sp_rescale_profile, sp_dcast_profile, sp_species_cor, sp_profile_dist, sp_match_profile, sp_melt_wide
    • reduced object classes

  • [0.2.1]

    • released 2023-06-21
    • updated sysdata (now using SPECIATE 5.2)
    • added sp_find_species
    • extended sp_find_profile; now searches by species_name
    • simplified plot.respeciate

  • [0.2.0]

    • released 2021-05-26
    • Karl Ropkins joined
    • moved your sysdata.rda to the package data folder
    • reset lazy.data to TRUE
    • added an object class
    • added sp_find_profile (find_code but making object class)
    • added sp_profile (spec but making object class)
    • added crude print and plot methods for object classes
    • updated date and version
    • The new code is in R:speciate.0.2.r

Release Notes Version 0.1

  • [0.1.0]
    • released 2020-12-20
    • Created respeciate