undefined symbol: iJIT_NotifyEvent when running test

[Evert-Homan]

Hi,

I followed the installation instructions, and then get the following error when running the test script:

python test_pyg.py Traceback (most recent call last): File "test_pyg.py", line 5, in <module> import torch File "/home/evehom/miniconda3/envs/dragonfly_gen/lib/python3.8/site-packages/torch/__init__.py", line 218, in <module> from torch._C import * # noqa: F403 ImportError: /home/evehom/miniconda3/envs/dragonfly_gen/lib/python3.8/site-packages/torch/lib/libtorch_cpu.so: undefined symbol: iJIT_NotifyEvent

It seems that Dragonfly does not need GPU support, is this correct?

Please advise on how to proceed.

Thanks/Evert

[viv3kanand]

Add mkl=2024.0 to the environment.yml file. It solves the issue

Check https://github.com/pytorch/pytorch/issues/123097 for details

[Evert-Homan]

python test_pyg.py
torch_geometric.__version__: 2.3.0
torch.__version__: 1.13.1
rdkit.__version__: 2022.09.5

Thank you!

BW/Evert