MRMFeatureValidation

[dmccloskey]

Description

Conversion of MRMFeatureValidation from .py to .cpp. In addition, load_validationData from FileReaderOpenMS class will need to be implemented to read validation data from .csv. Please note that the functionality of load_validationData corresponding to accessing data from a database does not need to be implemented (i.e., db_json_i parameter can be ignored).

Objectives

• re-implementation of all methods from MRMFeatureValidation
• re-implementation of load_validationData without DB access functionality

Validation

• converted and passing unit tests

[dmccloskey]

The columns that will need to be read in are the following:
original_filename,sample_name,sample_type,acquisition_date_and_time,acq_method_name,component_name,component_group_name,retention_time,start_time,end_time,used_,calculated_concentration,experiment_id,acquisition_method_id,height,area

[pcolaianni]

Should all read rows be pushed into the vector, or should the value of used decide on that?
@dmccloskey

[dmccloskey]

Good observation. Only the rows with a used_ = true should be read in. This was not done originally, but will minimize the needed data since false rows will not be used at all.

[pcolaianni]

• Move metrics methods to Utilities
• use template to support any kind of label type (double, float, etc)