TODOS.md

• Finalize logo
• Add DNA/RNA type specification in Maker -- integrate it
• Saner Background
• Rewrite all public function docs
• Integrate new API changes
• Fix Global Function Checks
• Write all Input Validation
• Write up README sketch
• Integrate output_file for Finder
• Add jupyter and scikit-learn dependencies
• Remove Plyvel switch to LevelDB
• Fix Local Traceback after refactoring
• Update docs
• Cleanup unnecessary formatting
• Introduce missing states
• Finish notebook of examples
• Base pairing spec check
• part_type must be constraint
• Select ) nucleotides carefully
• Saner GU support for RNA types
• Catch dynamically inserted constant
• Fix ) traceback
• Handle Lmax panlindromes
• Fix type checking typos
• Introduce enhanced clear
• Finish unit testing
• Finish setup.py
• Publish to PyPI