NewAnce is a java software tool for proteogenomics. It performs stratified FDR calculation and combines the two MS/MS search engines Comet and MaxQuant. This allows to obtain accurate PSMs even in the case of large proteogenomics databases.
Copyright (C) SIB - Swiss Institute of Bioinformatics, Lausanne, Switzerland
Copyright (C) LICR - Ludwig Institute of Cancer Research, Lausanne, Switzerland
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program. If not, see https://www.gnu.org/licenses/.
Markus Müller, CHUV/SIB, Lausanne, Switzerland (Markus.Muller@chuv.ch, markus.mueller@sib.swiss)