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usage_atlasaverage.rst

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atlasaverage

Description:

Average data within atlas regions.

Inputs:

datafile - The name of the 3 or 4D nifti file with the data to be averaged over atlas regions. templatefile - The name of the atlas region NIFTI file outputroot - The root name of the output files.

Outputs:

A csv file containing the summary metrics for each region in the atlas.

Usage:

Debugging options : @skip

skip debugging options