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feat: allow mehari to write out VarFish compatible TSV (#34) #35

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merged 12 commits into from
Apr 5, 2023

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@holtgrewe holtgrewe linked an issue Apr 4, 2023 that may be closed by this pull request
@holtgrewe holtgrewe changed the title feat: allow mehari to write out varfish compatible tsv (#34) feat: allow mehari to write out VarFish compatible TSV (#34) Apr 4, 2023
@holtgrewe holtgrewe marked this pull request as ready for review April 5, 2023 08:49
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codecov bot commented Apr 5, 2023

Codecov Report

Patch coverage: 72.90% and project coverage change: -0.03 ⚠️

Comparison is base (c521980) 74.63% compared to head (5e16ade) 74.60%.

Additional details and impacted files
@@            Coverage Diff             @@
##             main      #35      +/-   ##
==========================================
- Coverage   74.63%   74.60%   -0.03%     
==========================================
  Files          11       12       +1     
  Lines        2846     3422     +576     
==========================================
+ Hits         2124     2553     +429     
- Misses        722      869     +147     
Impacted Files Coverage Δ
src/common.rs 40.00% <0.00%> (-40.00%) ⬇️
src/main.rs 0.00% <ø> (ø)
src/annotate/seqvars/mod.rs 68.96% <67.78%> (+0.59%) ⬆️
src/annotate/seqvars/csq.rs 71.58% <81.48%> (+0.02%) ⬆️
src/annotate/seqvars/ann.rs 95.69% <86.15%> (-1.24%) ⬇️
src/ped.rs 93.42% <93.42%> (ø)

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@holtgrewe holtgrewe merged commit 72c6832 into main Apr 5, 2023
@holtgrewe holtgrewe deleted the 34-allow-mehari-to-write-out-varfish-compatible-tsv branch April 5, 2023 09:28
@github-actions github-actions bot mentioned this pull request Apr 5, 2023
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Allow mehari to write out VarFish compatible TSV
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