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I am not sure whether you are aware that the Bioconductor check fails on Linux x86_64 and aarch64 with:
* checking data for non-ASCII characters ... WARNING
Error loading dataset 'k562_scatac_chr14':
Error in .requirePackage(package) :
unable to find required package 'csaw'
Error loading dataset 'ss3_umi_sce':
Error in .requirePackage(package) :
unable to find required package 'SingleCellExperiment'
The dataset(s) may use package(s) not declared in Depends/Imports.
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
scCompartments 81.621 1.832 83.454
getDenoisedMatrix 7.197 0.272 7.468
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
‘compartmap_vignette.Rmd’ using ‘UTF-8’... OK
NONE
* checking re-building of vignette outputs ... ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘compartmap_vignette.Rmd’ using rmarkdown
Quitting from lines 2-16 (compartmap_vignette.Rmd)
Error: processing vignette 'compartmap_vignette.Rmd' failed with diagnostics:
there is no package called 'BiocStyle'
--- failed re-building ‘compartmap_vignette.Rmd’
SUMMARY: processing the following file failed:
‘compartmap_vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
The text was updated successfully, but these errors were encountered:
Hello,
I am not sure whether you are aware that the Bioconductor check fails on Linux x86_64 and aarch64 with:
The text was updated successfully, but these errors were encountered: