refarctoring for HEADLESS

bioclipse · Oct 26, 2010 · 3d369d7 · 3d369d7
1 parent 52a9162
commit 3d369d7
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Showing 38 changed files with 100 additions and 93 deletions.
diff --git a/plugins/net.bioclipse.align.kalign.ws.tests/META-INF/MANIFEST.MF b/plugins/net.bioclipse.align.kalign.ws.tests/META-INF/MANIFEST.MF
@@ -11,6 +11,7 @@ Require-Bundle: org.eclipse.ui,
  net.bioclipse.core.tests;bundle-version="0.1.0",
  net.bioclipse.biojava.business;bundle-version="0.1.0",
  org.junit4;bundle-version="4.3.1",
- net.bioclipse.align.kalign.ws;bundle-version="1.0.0"
+ net.bioclipse.align.kalign.ws;bundle-version="1.0.0",
+ net.bioclipse.core.api;bundle-version="1.0.0"
 Bundle-RequiredExecutionEnvironment: J2SE-1.5
 Bundle-ActivationPolicy: lazy
diff --git a/...gn.kalign.ws.tests/src/net/bioclipse/align/kalign/ws/tests/PluginTestKalignwsManager.java b/...gn.kalign.ws.tests/src/net/bioclipse/align/kalign/ws/tests/PluginTestKalignwsManager.java
@@ -18,9 +18,9 @@
 import net.bioclipse.align.kalign.ws.Activator;
 import net.bioclipse.align.kalign.ws.business.IKalignManager;
 import net.bioclipse.biojava.business.IBiojavaManager;
-import net.bioclipse.core.business.BioclipseException;
+import net.bioclipse.core.api.BioclipseException;
-import net.bioclipse.core.domain.IDNA;
+import net.bioclipse.core.api.domain.IDNA;
-import net.bioclipse.core.domain.IProtein;
+import net.bioclipse.core.api.domain.IProtein;
 
 import org.junit.Test;
 

diff --git a/plugins/net.bioclipse.align.kalign.ws/META-INF/MANIFEST.MF b/plugins/net.bioclipse.align.kalign.ws/META-INF/MANIFEST.MF
@@ -13,7 +13,8 @@ Require-Bundle: org.eclipse.ui,
  net.bioclipse.biojava,
  net.bioclipse.biojava.ui,
  org.eclipse.core.resources,
- net.bioclipse.ui.business;bundle-version="2.1.1"
+ net.bioclipse.ui.business;bundle-version="2.1.1",
+ net.bioclipse.core.api;bundle-version="1.0.0"
 Bundle-ActivationPolicy: lazy
 Bundle-RequiredExecutionEnvironment: J2SE-1.5
 Bundle-ClassPath: .,

diff --git a/...ioclipse.align.kalign.ws/src/net/bioclipse/align/kalign/ws/business/IKalignJSManager.java b/...ioclipse.align.kalign.ws/src/net/bioclipse/align/kalign/ws/business/IKalignJSManager.java
@@ -10,7 +10,7 @@
  ******************************************************************************/
 package net.bioclipse.align.kalign.ws.business;
 
-import net.bioclipse.managers.business.IBioclipseJSManager;
+import net.bioclipse.core.api.managers.IBioclipseJSManager;
 
 /**
  * 

diff --git a/....bioclipse.align.kalign.ws/src/net/bioclipse/align/kalign/ws/business/IKalignManager.java b/....bioclipse.align.kalign.ws/src/net/bioclipse/align/kalign/ws/business/IKalignManager.java
@@ -12,13 +12,13 @@
 
 import java.util.List;
 
-import net.bioclipse.core.PublishedClass;
+import net.bioclipse.core.api.BioclipseException;
-import net.bioclipse.core.PublishedMethod;
+import net.bioclipse.core.api.Recorded;
-import net.bioclipse.core.Recorded;
+import net.bioclipse.core.api.domain.IDNA;
-import net.bioclipse.core.business.BioclipseException;
+import net.bioclipse.core.api.domain.IProtein;
-import net.bioclipse.core.domain.IDNA;
+import net.bioclipse.core.api.managers.IBioclipseManager;
-import net.bioclipse.core.domain.IProtein;
+import net.bioclipse.core.api.managers.PublishedClass;
-import net.bioclipse.managers.business.IBioclipseManager;
+import net.bioclipse.core.api.managers.PublishedMethod;
 
 @PublishedClass(value = "Controls access to KAlign Webservice at EBI.")
 /**

diff --git a/...t.bioclipse.align.kalign.ws/src/net/bioclipse/align/kalign/ws/business/KalignManager.java b/...t.bioclipse.align.kalign.ws/src/net/bioclipse/align/kalign/ws/business/KalignManager.java
@@ -35,12 +35,12 @@
 import net.bioclipse.align.kalign.ws.util.SequenceCollectionContentHandler;
 import net.bioclipse.biojava.business.Activator;
 import net.bioclipse.biojava.business.IBiojavaManager;
-import net.bioclipse.core.business.BioclipseException;
+import net.bioclipse.core.api.BioclipseException;
-import net.bioclipse.core.domain.IDNA;
+import net.bioclipse.core.api.domain.IDNA;
-import net.bioclipse.core.domain.IProtein;
+import net.bioclipse.core.api.domain.IProtein;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
-import net.bioclipse.core.domain.RecordableList;
+import net.bioclipse.core.api.domain.RecordableList;
-import net.bioclipse.managers.business.IBioclipseManager;
+import net.bioclipse.core.api.managers.IBioclipseManager;
 
 
 /**

diff --git a/...et.bioclipse.align.kalign.ws/src/net/bioclipse/align/kalign/ws/handlers/AlignHandler.java b/...et.bioclipse.align.kalign.ws/src/net/bioclipse/align/kalign/ws/handlers/AlignHandler.java
@@ -17,9 +17,9 @@
 import net.bioclipse.align.kalign.ws.Activator;
 import net.bioclipse.align.kalign.ws.business.IKalignManager;
 import net.bioclipse.biojava.ui.editors.SequenceEditor;
-import net.bioclipse.core.business.BioclipseException;
+import net.bioclipse.core.api.BioclipseException;
-import net.bioclipse.core.domain.IProtein;
+import net.bioclipse.core.api.domain.IProtein;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 
 import org.eclipse.core.commands.AbstractHandler;
 import org.eclipse.core.commands.ExecutionEvent;

diff --git a/...clipse.align.kalign.ws/src/net/bioclipse/align/kalign/ws/handlers/KalignPopupHandler.java b/...clipse.align.kalign.ws/src/net/bioclipse/align/kalign/ws/handlers/KalignPopupHandler.java
@@ -17,9 +17,9 @@
 import net.bioclipse.align.kalign.ws.Activator;
 import net.bioclipse.align.kalign.ws.business.IKalignManager;
 import net.bioclipse.biojava.business.IBiojavaManager;
-import net.bioclipse.core.business.BioclipseException;
+import net.bioclipse.core.api.BioclipseException;
-import net.bioclipse.core.domain.IProtein;
+import net.bioclipse.core.api.domain.IProtein;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 import net.bioclipse.ui.business.IUIManager;
 
 import org.apache.log4j.Logger;

diff --git a/...gn.kalign.ws/src/net/bioclipse/align/kalign/ws/util/SequenceCollectionContentHandler.java b/...gn.kalign.ws/src/net/bioclipse/align/kalign/ws/util/SequenceCollectionContentHandler.java
@@ -14,7 +14,7 @@
 
 import net.bioclipse.biojava.business.Activator;
 import net.bioclipse.biojava.business.IBiojavaManager;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 
 import org.biojava.bio.seq.DNATools;
 import org.biojava.bio.seq.ProteinTools;

diff --git a/plugins/net.bioclipse.biojava.business.tests/META-INF/MANIFEST.MF b/plugins/net.bioclipse.biojava.business.tests/META-INF/MANIFEST.MF
@@ -8,7 +8,8 @@ Require-Bundle: org.eclipse.core.runtime,
  net.bioclipse.biojava.business,
  net.bioclipse.core,
  net.bioclipse.biojava,
- net.bioclipse.scripting
+ net.bioclipse.scripting,
+ net.bioclipse.core.api;bundle-version="1.0.0"
 Eclipse-LazyStart: true
 Bundle-ClassPath: .
 Export-Package: net.bioclipse.biojava.business,

diff --git a/...lipse.biojava.business.tests/tests/net/bioclipse/biojava/business/BiojavaManagerTest.java b/...lipse.biojava.business.tests/tests/net/bioclipse/biojava/business/BiojavaManagerTest.java
@@ -15,9 +15,9 @@
 import net.bioclipse.biojava.domain.BiojavaDNA;
 import net.bioclipse.biojava.domain.BiojavaProtein;
 import net.bioclipse.biojava.domain.BiojavaRNA;
-import net.bioclipse.core.domain.IDNA;
+import net.bioclipse.core.api.domain.IDNA;
-import net.bioclipse.core.domain.IProtein;
+import net.bioclipse.core.api.domain.IProtein;
-import net.bioclipse.core.domain.IRNA;
+import net.bioclipse.core.api.domain.IRNA;
 
 import org.junit.Test;
 

diff --git a/plugins/net.bioclipse.biojava.business/META-INF/MANIFEST.MF b/plugins/net.bioclipse.biojava.business/META-INF/MANIFEST.MF
@@ -16,7 +16,8 @@ Require-Bundle: org.eclipse.core.runtime,
  org.eclipse.core.resources,
  org.springframework.bundle.spring.aop,
  net.sf.cglib,
- org.springframework.osgi.aopalliance.osgi;bundle-version="1.0.0"
+ org.springframework.osgi.aopalliance.osgi;bundle-version="1.0.0",
+ net.bioclipse.core.api;bundle-version="1.0.0"
 Export-Package: net.bioclipse.biojava.business,
  net.bioclipse.biojava.domain
 Bundle-Vendor: The Bioclipse Team

diff --git a/...ins/net.bioclipse.biojava.business/src/net/bioclipse/biojava/business/BiojavaManager.java b/...ins/net.bioclipse.biojava.business/src/net/bioclipse/biojava/business/BiojavaManager.java
@@ -42,13 +42,13 @@
 import net.bioclipse.biojava.domain.BiojavaProtein;
 import net.bioclipse.biojava.domain.BiojavaRNA;
 import net.bioclipse.biojava.domain.IFeature;
-import net.bioclipse.core.business.BioclipseException;
+import net.bioclipse.core.api.BioclipseException;
-import net.bioclipse.core.domain.IDNA;
+import net.bioclipse.core.api.domain.IDNA;
-import net.bioclipse.core.domain.IProtein;
+import net.bioclipse.core.api.domain.IProtein;
-import net.bioclipse.core.domain.IRNA;
+import net.bioclipse.core.api.domain.IRNA;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
-import net.bioclipse.core.domain.RecordableList;
+import net.bioclipse.core.api.domain.RecordableList;
-import net.bioclipse.managers.business.IBioclipseManager;
+import net.bioclipse.core.api.managers.IBioclipseManager;
 
 import org.apache.log4j.Logger;
 import org.biojava.bio.BioException;

diff --git a/...ns/net.bioclipse.biojava.business/src/net/bioclipse/biojava/business/IBiojavaManager.java b/...ns/net.bioclipse.biojava.business/src/net/bioclipse/biojava/business/IBiojavaManager.java
@@ -21,15 +21,15 @@
 import org.eclipse.core.runtime.IProgressMonitor;
 
 import net.bioclipse.biojava.domain.IFeature;
-import net.bioclipse.core.PublishedClass;
+import net.bioclipse.core.api.BioclipseException;
-import net.bioclipse.core.PublishedMethod;
+import net.bioclipse.core.api.domain.IDNA;
-import net.bioclipse.core.business.BioclipseException;
+import net.bioclipse.core.api.domain.IProtein;
-import net.bioclipse.core.domain.IDNA;
+import net.bioclipse.core.api.domain.IRNA;
-import net.bioclipse.core.domain.IProtein;
+import net.bioclipse.core.api.domain.ISequence;
-import net.bioclipse.core.domain.IRNA;
+import net.bioclipse.core.api.domain.RecordableList;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.managers.IBioclipseManager;
-import net.bioclipse.core.domain.RecordableList;
+import net.bioclipse.core.api.managers.PublishedClass;
-import net.bioclipse.managers.business.IBioclipseManager;
+import net.bioclipse.core.api.managers.PublishedMethod;
 
 /**
  * @author jonalv, ola

diff --git a/...clipse.biojava.business/src/net/bioclipse/biojava/business/IJavaScriptBiojavaManager.java b/...clipse.biojava.business/src/net/bioclipse/biojava/business/IJavaScriptBiojavaManager.java
@@ -10,7 +10,7 @@
  ******************************************************************************/
 package net.bioclipse.biojava.business;
 
-import net.bioclipse.managers.business.IBioclipseJSManager;
+import net.bioclipse.core.api.managers.IBioclipseJSManager;
 
 public interface IJavaScriptBiojavaManager
        extends IBiojavaManager, IBioclipseJSManager {

diff --git a/plugins/net.bioclipse.biojava.business/src/net/bioclipse/biojava/domain/BiojavaDNA.java b/plugins/net.bioclipse.biojava.business/src/net/bioclipse/biojava/domain/BiojavaDNA.java
@@ -14,7 +14,7 @@
 
 import org.biojava.bio.seq.Sequence;
 
-import net.bioclipse.core.domain.IDNA;
+import net.bioclipse.core.api.domain.IDNA;
 
 public class BiojavaDNA extends BiojavaSequence
                         implements IDNA {

diff --git a/plugins/net.bioclipse.biojava.business/src/net/bioclipse/biojava/domain/BiojavaProtein.java b/plugins/net.bioclipse.biojava.business/src/net/bioclipse/biojava/domain/BiojavaProtein.java
@@ -12,7 +12,7 @@
  ******************************************************************************/
 package net.bioclipse.biojava.domain;
 
-import net.bioclipse.core.domain.IProtein;
+import net.bioclipse.core.api.domain.IProtein;
 
 import org.biojava.bio.seq.Sequence;
 

diff --git a/plugins/net.bioclipse.biojava.business/src/net/bioclipse/biojava/domain/BiojavaRNA.java b/plugins/net.bioclipse.biojava.business/src/net/bioclipse/biojava/domain/BiojavaRNA.java
@@ -14,7 +14,7 @@
 
 import org.biojava.bio.seq.Sequence;
 
-import net.bioclipse.core.domain.IRNA;
+import net.bioclipse.core.api.domain.IRNA;
 
 public class BiojavaRNA extends BiojavaSequence 
                                 implements IRNA {

diff --git a/plugins/net.bioclipse.biojava.business/src/net/bioclipse/biojava/domain/BiojavaSequence.java b/plugins/net.bioclipse.biojava.business/src/net/bioclipse/biojava/domain/BiojavaSequence.java
@@ -15,9 +15,9 @@
 import java.io.ByteArrayOutputStream;
 import java.io.IOException;
 
-import net.bioclipse.core.Recorded;
+import net.bioclipse.core.api.Recorded;
-import net.bioclipse.core.domain.BioObject;
+import net.bioclipse.core.api.domain.BioObject;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 
 import org.biojava.bio.seq.Sequence;
 import org.biojavax.Namespace;

diff --git a/plugins/net.bioclipse.biojava.ui/META-INF/MANIFEST.MF b/plugins/net.bioclipse.biojava.ui/META-INF/MANIFEST.MF
@@ -17,7 +17,8 @@ Require-Bundle: org.eclipse.ui,
  org.eclipse.ui.forms,
  org.eclipse.ui.ide,
  org.eclipse.ui.views;bundle-version="3.3.0",
- net.bioclipse.ui.business;bundle-version="2.0.0"
+ net.bioclipse.ui.business;bundle-version="2.0.0",
+ net.bioclipse.core.api;bundle-version="1.0.0"
 Bundle-ActivationPolicy: lazy
 Export-Package: net.bioclipse.biojava.ui,
  net.bioclipse.biojava.ui.actions,

diff --git a/plugins/net.bioclipse.biojava.ui/plugin.xml b/plugins/net.bioclipse.biojava.ui/plugin.xml
@@ -30,12 +30,12 @@
         <BioObject
             describer="net.bioclipse.biojava.ui.describer.SequenceEditorDescriber"
             id="net.bioclipse.cdk.sequenceditor.describer"
-            objectClass="net.bioclipse.core.domain.RecordableList">
+            objectClass="net.bioclipse.core.api.domain.RecordableList">
         </BioObject>
         <BioObject
             describer="net.bioclipse.biojava.ui.describer.SequenceEditorDescriber"
             id="net.bioclipse.cdk.sequenceditor.describer"
-            objectClass="net.bioclipse.core.domain.ISequence">
+            objectClass="net.bioclipse.core.api.domain.ISequence">
         </BioObject>
    </extension>
 

diff --git a/plugins/net.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/actions/TranslateAction.java b/plugins/net.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/actions/TranslateAction.java
@@ -15,7 +15,7 @@
 
 import net.bioclipse.biojava.business.Activator;
 import net.bioclipse.biojava.business.IBiojavaManager;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 
 import org.eclipse.jface.action.IAction;
 import org.eclipse.jface.dialogs.MessageDialog;

diff --git a/...ioclipse.biojava.ui/src/net/bioclipse/biojava/ui/actions/TranslateDNAToProteinAction.java b/...ioclipse.biojava.ui/src/net/bioclipse/biojava/ui/actions/TranslateDNAToProteinAction.java
@@ -14,8 +14,8 @@
 import java.io.IOException;
 
 import net.bioclipse.biojava.domain.BiojavaDNA;
-import net.bioclipse.core.domain.IDNA;
+import net.bioclipse.core.api.domain.IDNA;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 
 public class TranslateDNAToProteinAction extends TranslateAction{
 

diff --git a/...et.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/actions/TranslateDNAToRNAAction.java b/...et.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/actions/TranslateDNAToRNAAction.java
@@ -14,8 +14,8 @@
 import java.io.IOException;
 
 import net.bioclipse.biojava.domain.BiojavaDNA;
-import net.bioclipse.core.domain.IDNA;
+import net.bioclipse.core.api.domain.IDNA;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 
 public class TranslateDNAToRNAAction extends TranslateAction{
 

diff --git a/...et.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/actions/TranslateRNAToDNAAction.java b/...et.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/actions/TranslateRNAToDNAAction.java
@@ -15,7 +15,7 @@
 
 import org.apache.log4j.Logger;
 
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 
 
 /**

diff --git a/...ioclipse.biojava.ui/src/net/bioclipse/biojava/ui/actions/TranslateRNAToProteinAction.java b/...ioclipse.biojava.ui/src/net/bioclipse/biojava/ui/actions/TranslateRNAToProteinAction.java
@@ -15,7 +15,7 @@
 
 import org.apache.log4j.Logger;
 
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 
 
 /**

diff --git a/....bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/describer/SequenceEditorDescriber.java b/....bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/describer/SequenceEditorDescriber.java
@@ -1,10 +1,10 @@
 package net.bioclipse.biojava.ui.describer;
 
 import net.bioclipse.biojava.ui.editors.SequenceEditor;
-import net.bioclipse.core.business.BioclipseException;
+import net.bioclipse.core.api.BioclipseException;
-import net.bioclipse.core.domain.IBioObject;
+import net.bioclipse.core.api.domain.IBioObject;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
-import net.bioclipse.core.domain.RecordableList;
+import net.bioclipse.core.api.domain.RecordableList;
 import net.bioclipse.ui.business.describer.IBioObjectDescriber;
 
 

diff --git a/plugins/net.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/editors/Aligner.java b/plugins/net.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/editors/Aligner.java
@@ -19,7 +19,7 @@
 
 import net.bioclipse.biojava.business.Activator;
 import net.bioclipse.biojava.business.IBiojavaManager;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 import net.bioclipse.ui.editors.ColorManager;
 
 import org.eclipse.core.resources.IFile;

diff --git a/plugins/net.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/editors/SequenceEditor.java b/plugins/net.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/editors/SequenceEditor.java
@@ -14,8 +14,8 @@
 import net.bioclipse.biojava.business.Activator;
 import net.bioclipse.biojava.business.IBiojavaManager;
 import net.bioclipse.biojava.ui.views.outline.SequenceOutlinePage;
-import net.bioclipse.core.business.BioclipseException;
+import net.bioclipse.core.api.BioclipseException;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 import net.bioclipse.core.util.LogUtils;
 
 import org.apache.log4j.Logger;

diff --git a/.../net.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/views/SequenceContentProvider.java b/.../net.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/views/SequenceContentProvider.java
@@ -28,8 +28,8 @@
 
 import net.bioclipse.biojava.business.Activator;
 import net.bioclipse.biojava.business.IBiojavaManager;
-import net.bioclipse.core.domain.IBioObject;
+import net.bioclipse.core.api.domain.IBioObject;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 import net.bioclipse.core.util.LogUtils;
 
 import org.apache.log4j.Logger;

diff --git a/...ns/net.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/views/SequenceLabelProvider.java b/...ns/net.bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/views/SequenceLabelProvider.java
@@ -24,8 +24,8 @@
 import java.util.List;
 
 import net.bioclipse.biojava.ui.Activator;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
-import net.bioclipse.core.domain.RecordableList;
+import net.bioclipse.core.api.domain.RecordableList;
 
 import org.eclipse.jface.resource.ImageDescriptor;
 import org.eclipse.jface.viewers.ILabelProvider;

diff --git a/....bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/views/outline/SequenceOutlinePage.java b/....bioclipse.biojava.ui/src/net/bioclipse/biojava/ui/views/outline/SequenceOutlinePage.java
@@ -11,7 +11,7 @@
 import net.bioclipse.biojava.business.IBiojavaManager;
 import net.bioclipse.biojava.ui.editors.Aligner;
 import net.bioclipse.biojava.ui.editors.SequenceEditor;
-import net.bioclipse.core.domain.ISequence;
+import net.bioclipse.core.api.domain.ISequence;
 
 import org.eclipse.core.resources.IFile;
 import org.eclipse.core.runtime.IAdaptable;

diff --git a/plugins/net.bioclipse.biows.tests/META-INF/MANIFEST.MF b/plugins/net.bioclipse.biows.tests/META-INF/MANIFEST.MF
@@ -11,7 +11,8 @@ Require-Bundle: org.eclipse.ui,
  net.bioclipse.core.tests;bundle-version="0.1.0",
  net.bioclipse.biojava.business;bundle-version="0.1.0",
  net.bioclipse.biows;bundle-version="0.1.1",
- org.junit4;bundle-version="4.3.1"
+ org.junit4;bundle-version="4.3.1",
+ net.bioclipse.core.api;bundle-version="1.0.0"
 Bundle-RequiredExecutionEnvironment: J2SE-1.5
 Bundle-ActivationPolicy: lazy
 Import-Package: org.apache.log4j