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meta.yaml
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meta.yaml
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{% set name = "srnapipe" %}
{% set version = "1.1" %}
{% set sha256 = "c1220a36e22e5403ced1633a32e3a60d394fbdf506a14e5b642a34fc81c2236b" %}
package:
name: {{ name }}
version: {{ version }}
source:
url: https://github.com/GReD-Clermont/sRNAPipe-cli/archive/v{{ version }}.tar.gz
sha256: {{ sha256 }}
build:
noarch: generic
number: 0
requirements:
host:
- perl
- perl-getopt-long
- perl-parallel-forkmanager
- perl-statistics-r
- perl-string-random
- perl-file-copy-recursive
- perl-math-cdf
run:
- perl
- perl-getopt-long
- perl-parallel-forkmanager
- perl-statistics-r
- perl-string-random
- perl-file-copy-recursive
- perl-math-cdf
- r-base
- r-rcolorbrewer
- r-ggplot2
- r-plotrix
- bioconductor-sushi
- bwa >=0.7.12
- bedtools >=2.24.0
- samtools >=1.5
test:
commands:
- srnapipe
about:
home: https://github.com/GReD-Clermont/sRNAPipe-cli
license: Academic Free License v3.0
summary: Pipeline for bioinformatic in-depth exploration of small RNA-seq data