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meta.yaml
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meta.yaml
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{% set version = "3.1.0" %}
{% set sha256 = "6b994fc545b80f7a30a426837eb023c4c03c3ffb5807f8513b7e176c3dd5f5ba" %}
package:
name: nanosim
version: {{ version }}
source:
url: https://github.com/bcgsc/NanoSim/archive/v{{ version }}.tar.gz
sha256: {{ sha256 }}
build:
noarch: generic
number: 0
requirements:
run:
- python
- numpy >=1.13.3
- scipy >=1.0.0
- scikit-learn >=0.20.0
- joblib
- six >=1.10.0
- pybedtools >=0.7.10
- pysam >=0.13
- htseq >=0.9.1
- minimap2
- last
- samtools
- genometools-genometools
test:
commands:
- read_analysis.py -h
- simulator.py -h
about:
home: https://github.com/bcgsc/NanoSim
license: GPL-3.0
license_file:
- COPYRIGHT
- LICENSE
summary: 'NanoSim is a fast and scalable read simulator for Nanopore sequencing data.'
extra:
identifiers:
- doi:10.1093/gigascience/gix010
- doi:10.1093/gigascience/giaa061