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Merge pull request #1310 from squirrelo/portals-pet
Portals pet - Jose & Yoshiki
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,90 @@ | ||
| # ----------------------------------------------------------------------------- | ||
| # Copyright (c) 2014--, The Qiita Development Team. | ||
| # | ||
| # Distributed under the terms of the BSD 3-clause License. | ||
| # | ||
| # The full license is in the file LICENSE, distributed with this software. | ||
| # ----------------------------------------------------------------------------- | ||
| import warnings | ||
| from json import dumps | ||
| from copy import deepcopy | ||
|
|
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| from tornado.web import authenticated, HTTPError | ||
|
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| from qiita_db.study import Study | ||
| from qiita_db.portal import Portal | ||
| from .base_handlers import BaseHandler | ||
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|
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| class PortalEditBase(BaseHandler): | ||
| study_cols = ['study_id', 'study_title', 'study_alias'] | ||
|
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| def check_admin(self): | ||
| if self.current_user.level != "admin": | ||
| raise HTTPError(403, "%s does not have access to portal editing!" % | ||
| self.current_user.id) | ||
|
|
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| def get_info(self, portal="QIITA"): | ||
| # Add the portals and, optionally, checkbox to the information | ||
| studies = Portal(portal).get_studies() | ||
| if not studies: | ||
| return [] | ||
|
|
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| study_info = Study.get_info(studies, info_cols=self.study_cols) | ||
| info = [] | ||
| for s in study_info: | ||
| # Make sure in correct order | ||
| hold = dict(s) | ||
| hold['portals'] = ', '.join(sorted(Study(s['study_id'])._portals)) | ||
| info.append(hold) | ||
| return info | ||
|
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|
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| class StudyPortalHandler(PortalEditBase): | ||
| @authenticated | ||
| def get(self): | ||
| self.check_admin() | ||
| info = self.get_info() | ||
| portals = Portal.list_portals() | ||
| headers = deepcopy(self.study_cols) | ||
| headers.insert(0, "portals") | ||
| self.render('portals_edit.html', headers=headers, info=info, | ||
| portals=portals, submit_url="/admin/portals/studies/") | ||
|
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| @authenticated | ||
| def post(self): | ||
| self.check_admin() | ||
| portal = self.get_argument('portal') | ||
| studies = map(int, self.get_arguments('selected')) | ||
| action = self.get_argument('action') | ||
|
|
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| portal = Portal(portal) | ||
| with warnings.catch_warnings(record=True) as warns: | ||
| if action == "Add": | ||
| portal.add_studies(studies) | ||
| elif action == "Remove": | ||
| portal.remove_studies(studies) | ||
| else: | ||
| raise HTTPError(400, "Unknown action: %s" % action) | ||
|
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| msg = '; '.join([str(w.message) for w in warns]) | ||
| self.write(action + " completed successfully<br/>" + msg) | ||
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| class StudyPortalAJAXHandler(PortalEditBase): | ||
| @authenticated | ||
| def get(self): | ||
| self.check_admin() | ||
| portal = self.get_argument('view-portal') | ||
| echo = self.get_argument('sEcho') | ||
| info = self.get_info(portal=portal) | ||
| # build the table json | ||
| results = { | ||
| "sEcho": echo, | ||
| "iTotalRecords": len(info), | ||
| "iTotalDisplayRecords": len(info), | ||
| "aaData": info | ||
| } | ||
|
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| # return the json in compact form to save transmit size | ||
| self.write(dumps(results, separators=(',', ':'))) |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,164 @@ | ||
| {% extends sitebase.html%} | ||
|
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| {%block head%} | ||
| <link rel="stylesheet" href="/static/vendor/css/jquery.dataTables.css" type="text/css"> | ||
| <style type="text/css"> | ||
| .navlist li | ||
| { | ||
| display: inline; | ||
| padding-right: 20px; | ||
| } | ||
| .portal-select { | ||
| width: 15em; | ||
| } | ||
| .alert { | ||
| position: fixed; | ||
| top: 55px; | ||
| left:40%; | ||
| z-index:100; | ||
| white-space: nowrap; | ||
| } | ||
| </style> | ||
| <script src="/static/vendor/js/jquery.dataTables.min.js"></script> | ||
| <script type="text/javascript"> | ||
| function check_submit(action) { | ||
| //disable submit buttons | ||
| $("#add-button").prop('disabled', true); | ||
| $("#remove-button").prop('disabled', true); | ||
| $("#messages").html(""); | ||
| var errors = ""; | ||
| if($("#portal").val() === '') { | ||
| //No selected portal, so add error message if needed and then don't submit | ||
| if(!$('#portal-error').length) { errors += "Please select a portal<br/>"; } | ||
| } | ||
| var boxes = oTable.$(".selected:checked", {"page": "all"}); | ||
| //serialize the checked boxes | ||
| var data = ""; | ||
| for(i=0;i<boxes.length;i++) { | ||
| data += "&selected="+boxes[i].value; | ||
| } | ||
| if(data.length === 0) { | ||
| //No checked rows, so add error message if needed and then don't submit | ||
| if(!$('#checkbox-error').length) { errors += "Please select at least one row<br/>"; } | ||
| } | ||
| if(errors.length > 0) { | ||
| $("#add-button").prop('disabled', false); | ||
| $("#remove-button").prop('disabled', false); | ||
| bootstrapAlert(errors, "danger", 1900); | ||
| return false; | ||
| } | ||
| $('#action').val(action); | ||
| data = $('#portal-form').serialize() + data; | ||
| $.post('{{submit_url}}', data, function(data,textStatus,jqXHR){ | ||
| $("#add-button").prop('disabled', false); | ||
| $("#remove-button").prop('disabled', false); | ||
| var echo = "?sEcho=" + Math.floor(Math.random()*1001) + "&view-portal=" + $("#view-portal").val(); | ||
| $('#info-table').DataTable().ajax.url("/admin/portals/studiesAJAX/" + echo).load(); | ||
| bootstrapAlert(data, "success", 1900); | ||
| $("#portal").val(''); | ||
| }); | ||
| } | ||
|
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| function render_checkbox(data, type, full) { | ||
| return "<input type='checkbox' class='selected' onclick='checkbox_change()' value='" + full['study_id'] + "' />"; | ||
| } | ||
|
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| function checkbox_change() { | ||
| $("#checkbox-error").remove(); | ||
| } | ||
|
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| function checkbox_action(action) { | ||
| var boxes = oTable.$(':checkbox', {"filter":"applied", "page": "all"}); | ||
| if(action == 'check') { boxes.prop('checked',true); } | ||
| else if(action == 'uncheck') { boxes.prop('checked',false); } | ||
| else if(action='invert') { boxes.each( function() { | ||
| $(this).is(':checked') ? $(this).prop('checked',false) : $(this).prop('checked',true); | ||
| });} | ||
| return false; | ||
| } | ||
|
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| $(document).ready(function() { | ||
| oTable = $('#info-table').dataTable({ | ||
| "deferRender": true, | ||
| "iDisplayLength": 50, | ||
| "oLanguage": { | ||
| "sZeroRecords": "No studies belong to selected portal" | ||
| }, | ||
| "columns": [ | ||
| {"className": 'select', "data": null}, | ||
| {% for h in headers %} | ||
| {"data": "{{h}}"}, | ||
| {% end %} | ||
| ], | ||
| 'aoColumnDefs': [ | ||
| { 'mRender': render_checkbox, 'mData': 2, 'aTargets': [ 0 ] } | ||
| ], | ||
| "ajax": { | ||
| "url": "/admin/portals/studiesAJAX/?sEcho=" + Math.floor(Math.random()*1001) + "&view-portal=QIITA", | ||
| "aoColumns": [ | ||
| {"sSortDataType": "dom-checkbox", "bSearchable": false, "bSortable": false}, | ||
| {% for h in headers %} | ||
| {"data": "{{h}}"}, | ||
| {% end %} | ||
| ], | ||
| "error": function(jqXHR, textStatus, ex) { | ||
| $("#add-button").prop('disabled', true); | ||
| $("#remove-button").prop('disabled', true); | ||
| $("#errors").append("<li id='comm-error'>Internal Server Error, please try again later</li>"); | ||
| } | ||
| } | ||
| }); | ||
|
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| $('#portal').change(function(){ | ||
| $("#portal-error").remove(); | ||
| }); | ||
|
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| $('#view-portal').change(function() { | ||
| var echo = "?sEcho=" + Math.floor(Math.random()*1001) + "&view-portal=" + $("#view-portal").val(); | ||
| $('#info-table').DataTable().ajax.url("/admin/portals/studiesAJAX/" + echo).load(); | ||
| }); | ||
| }); | ||
| </script> | ||
| {%end%} | ||
|
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| {%block content%} | ||
| <div class="row topfloat"> | ||
| <div class='col-lg-12'> | ||
| <span style="float:right"><b>View from portal:</b> | ||
| <select name="view-portal" id="view-portal" class="portal-select"> | ||
| <option value="QIITA">QIITA</option> | ||
| {% for portal in portals %} | ||
| <option value="{{portal}}">{{portal}}</option> | ||
| {% end %} | ||
| </select> | ||
| </span> | ||
| <form role="form" id="portal-form"> | ||
| <select name="portal" id="portal" class="portal-select"> | ||
| <option value="">Select Portal...</option> | ||
| {% for portal in portals %} | ||
| <option value="{{portal}}">{{portal}}</option> | ||
| {% end %} | ||
| </select> | ||
| <input type="hidden" name="action" id="action" value=""> | ||
| <input type="button" id="add-button" value="Add" class="btn btn-sm btn-success" onclick="check_submit('Add')"> <input type="button" id="remove-button" value="Remove" class="btn btn-sm btn-danger" onclick="check_submit('Remove')"> | ||
| </form> | ||
| </div> | ||
| </div> | ||
| <div class='row' style="margin-top:50px"> | ||
| <div class='col-lg-12'> | ||
| <input type=button onclick="checkbox_action('check')" class="btn btn-xs btn-info" value="Select All"> | <input type=button onclick="checkbox_action('uncheck')" class="btn btn-xs btn-info" value="Select None"> | <input type=button onclick="checkbox_action('inverse')" class="btn btn-xs btn-info" value="Select Inverse"><br/> | ||
| <table id="info-table" class="table"> | ||
| <thead> | ||
| <tr> | ||
| <td>Select</td> | ||
| {% for head in headers %} | ||
| <td>{{head}}</td> | ||
| {% end %} | ||
| </tr> | ||
| </thead> | ||
| <tbody> | ||
| </tbody> | ||
| </table> | ||
| </div> | ||
| </div> | ||
| {% end %} |
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