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biolink-model.graphql
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biolink-model.graphql
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type AbstractEntity
{
}
type ActivityAndBehavior
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
regulatesProcessToProcess: [Occurrent]
hasParticipant: [NamedThing]
hasInput: [NamedThing]
hasOutput: [NamedThing]
precedes: [Occurrent]
}
interface AdministrativeEntity
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
}
type AnatomicalEntity implements ThingWithTaxon, PhysicalEntity
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
expresses: [GeneOrGeneProduct]
inTaxon: [OrganismTaxon]
}
type AnatomicalEntityToAnatomicalEntityAssociation
{
subject: AnatomicalEntity!
relation: Uriorcurie!
object: AnatomicalEntity!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
type AnatomicalEntityToAnatomicalEntityOntogenicAssociation
{
subject: AnatomicalEntity!
relation: Uriorcurie!
object: AnatomicalEntity!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
type AnatomicalEntityToAnatomicalEntityPartOfAssociation
{
subject: AnatomicalEntity!
relation: Uriorcurie!
object: AnatomicalEntity!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
type Association
{
subject: NamedThing!
relation: Uriorcurie!
object: NamedThing!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
hasConfidenceLevel: ConfidenceLevel
hasEvidence: EvidenceType
stageQualifier: LifeStage
quantifierQualifier: OntologyClass
frequencyQualifier: FrequencyValue
severityQualifier: SeverityValue
sexQualifier: BiologicalSex
onsetQualifier: Onset
clinicalModifierQualifier: ClinicalModifier
sequenceVariantQualifier: SequenceVariant
changeIsCatalyzedBy: [MacromolecularMachine]
}
type Attribute implements OntologyClass
{
hasAttributeType: OntologyClass
hasQuantitativeValue: [QuantityValue]
hasQualitativeValue: NamedThing
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
subclassOf: [IriType]
}
interface BiologicalEntity
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
}
type BiologicalProcess implements Occurrent
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
hasInput: [NamedThing]
hasOutput: [NamedThing]
enabledBy: [BiologicalProcessOrActivity]
regulatesProcessToProcess: [Occurrent]
hasParticipant: [NamedThing]
precedes: [Occurrent]
}
type BiologicalProcessOrActivity implements Occurrent
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
hasInput: [NamedThing]
hasOutput: [NamedThing]
enabledBy: [BiologicalProcessOrActivity]
regulatesProcessToProcess: [Occurrent]
hasParticipant: [NamedThing]
precedes: [Occurrent]
}
type BiologicalSex
{
hasAttributeType: OntologyClass
hasQuantitativeValue: [QuantityValue]
hasQualitativeValue: NamedThing
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
subclassOf: [IriType]
}
type Carbohydrate
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
molecularlyInteractsWith: [MolecularEntity]
affectsAbundanceOf: [MolecularEntity]
increasesAbundanceOf: [MolecularEntity]
decreasesAbundanceOf: [MolecularEntity]
affectsActivityOf: [MolecularEntity]
increasesActivityOf: [MolecularEntity]
decreasesActivityOf: [MolecularEntity]
affectsExpressionOf: [GenomicEntity]
increasesExpressionOf: [GenomicEntity]
decreasesExpressionOf: [GenomicEntity]
affectsFoldingOf: [MolecularEntity]
increasesFoldingOf: [MolecularEntity]
decreasesFoldingOf: [MolecularEntity]
affectsLocalizationOf: [MolecularEntity]
increasesLocalizationOf: [MolecularEntity]
decreasesLocalizationOf: [MolecularEntity]
affectsMetabolicProcessingOf: [MolecularEntity]
increasesMetabolicProcessingOf: [MolecularEntity]
decreasesMetabolicProcessingOf: [MolecularEntity]
affectsMolecularModificationOf: [MolecularEntity]
increasesMolecularModificationOf: [MolecularEntity]
decreasesMolecularModificationOf: [MolecularEntity]
affectsSynthesisOf: [MolecularEntity]
increasesSynthesisOf: [MolecularEntity]
decreasesSynthesisOf: [MolecularEntity]
affectsDegradationOf: [MolecularEntity]
increasesDegradationOf: [MolecularEntity]
decreasesDegradationOf: [MolecularEntity]
affectsMutationRateOf: [GenomicEntity]
increasesMutationRateOf: [GenomicEntity]
decreasesMutationRateOf: [GenomicEntity]
affectsResponseTo: [MolecularEntity]
increasesResponseTo: [MolecularEntity]
decreasesResponseTo: [MolecularEntity]
affectsSplicingOf: [Transcript]
increasesSplicingOf: [Transcript]
decreasesSplicingOf: [Transcript]
affectsStabilityOf: [MolecularEntity]
increasesStabilityOf: [MolecularEntity]
decreasesStabilityOf: [MolecularEntity]
affectsTransportOf: [MolecularEntity]
increasesTransportOf: [MolecularEntity]
decreasesTransportOf: [MolecularEntity]
affectsSecretionOf: [MolecularEntity]
increasesSecretionOf: [MolecularEntity]
decreasesSecretionOf: [MolecularEntity]
affectsUptakeOf: [MolecularEntity]
increasesUptakeOf: [MolecularEntity]
decreasesUptakeOf: [MolecularEntity]
regulatesEntityToEntity: [MolecularEntity]
biomarkerFor: [DiseaseOrPhenotypicFeature]
inTaxon: [OrganismTaxon]
}
type Case
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
inTaxon: [OrganismTaxon]
}
type CaseToPhenotypicFeatureAssociation implements EntityToPhenotypicFeatureAssociation, CaseToThingAssociation
{
subject: NamedThing!
relation: Uriorcurie!
object: NamedThing!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
sexQualifier: BiologicalSex
frequencyQualifier: FrequencyValue
severityQualifier: SeverityValue
onsetQualifier: Onset
}
interface CaseToThingAssociation
{
subject: Case!
relation: Uriorcurie!
object: NamedThing!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
type Cell
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
expresses: [GeneOrGeneProduct]
inTaxon: [OrganismTaxon]
}
type CellLine
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
}
type CellLineToDiseaseOrPhenotypicFeatureAssociation implements CellLineToThingAssociation, ThingToDiseaseOrPhenotypicFeatureAssociation
{
subject: DiseaseOrPhenotypicFeature!
relation: Uriorcurie!
object: NamedThing!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
interface CellLineToThingAssociation
{
subject: CellLine!
relation: Uriorcurie!
object: NamedThing!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
type CellularComponent
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
expresses: [GeneOrGeneProduct]
inTaxon: [OrganismTaxon]
}
type ChemicalSubstance
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
molecularlyInteractsWith: [MolecularEntity]
affectsAbundanceOf: [MolecularEntity]
increasesAbundanceOf: [MolecularEntity]
decreasesAbundanceOf: [MolecularEntity]
affectsActivityOf: [MolecularEntity]
increasesActivityOf: [MolecularEntity]
decreasesActivityOf: [MolecularEntity]
affectsExpressionOf: [GenomicEntity]
increasesExpressionOf: [GenomicEntity]
decreasesExpressionOf: [GenomicEntity]
affectsFoldingOf: [MolecularEntity]
increasesFoldingOf: [MolecularEntity]
decreasesFoldingOf: [MolecularEntity]
affectsLocalizationOf: [MolecularEntity]
increasesLocalizationOf: [MolecularEntity]
decreasesLocalizationOf: [MolecularEntity]
affectsMetabolicProcessingOf: [MolecularEntity]
increasesMetabolicProcessingOf: [MolecularEntity]
decreasesMetabolicProcessingOf: [MolecularEntity]
affectsMolecularModificationOf: [MolecularEntity]
increasesMolecularModificationOf: [MolecularEntity]
decreasesMolecularModificationOf: [MolecularEntity]
affectsSynthesisOf: [MolecularEntity]
increasesSynthesisOf: [MolecularEntity]
decreasesSynthesisOf: [MolecularEntity]
affectsDegradationOf: [MolecularEntity]
increasesDegradationOf: [MolecularEntity]
decreasesDegradationOf: [MolecularEntity]
affectsMutationRateOf: [GenomicEntity]
increasesMutationRateOf: [GenomicEntity]
decreasesMutationRateOf: [GenomicEntity]
affectsResponseTo: [MolecularEntity]
increasesResponseTo: [MolecularEntity]
decreasesResponseTo: [MolecularEntity]
affectsSplicingOf: [Transcript]
increasesSplicingOf: [Transcript]
decreasesSplicingOf: [Transcript]
affectsStabilityOf: [MolecularEntity]
increasesStabilityOf: [MolecularEntity]
decreasesStabilityOf: [MolecularEntity]
affectsTransportOf: [MolecularEntity]
increasesTransportOf: [MolecularEntity]
decreasesTransportOf: [MolecularEntity]
affectsSecretionOf: [MolecularEntity]
increasesSecretionOf: [MolecularEntity]
decreasesSecretionOf: [MolecularEntity]
affectsUptakeOf: [MolecularEntity]
increasesUptakeOf: [MolecularEntity]
decreasesUptakeOf: [MolecularEntity]
regulatesEntityToEntity: [MolecularEntity]
biomarkerFor: [DiseaseOrPhenotypicFeature]
inTaxon: [OrganismTaxon]
}
type ChemicalToChemicalAssociation implements ChemicalToThingAssociation
{
subject: NamedThing!
relation: Uriorcurie!
object: ChemicalSubstance!
id: IdentifierType!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
type ChemicalToChemicalDerivationAssociation
{
subject: ChemicalSubstance!
relation: Uriorcurie!
object: ChemicalSubstance!
id: IdentifierType!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
changeIsCatalyzedBy: [MacromolecularMachine]
}
type ChemicalToDiseaseOrPhenotypicFeatureAssociation implements ChemicalToThingAssociation, ThingToDiseaseOrPhenotypicFeatureAssociation
{
subject: NamedThing!
relation: Uriorcurie!
object: DiseaseOrPhenotypicFeature!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
type ChemicalToGeneAssociation implements ChemicalToThingAssociation
{
subject: NamedThing!
relation: Uriorcurie!
object: GeneOrGeneProduct!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
type ChemicalToPathwayAssociation implements ChemicalToThingAssociation
{
subject: NamedThing!
relation: Uriorcurie!
object: Pathway!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
interface ChemicalToThingAssociation
{
subject: ChemicalSubstance!
relation: Uriorcurie!
object: NamedThing!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
type ClinicalEntity
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
}
type ClinicalIntervention
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
}
type ClinicalModifier
{
hasAttributeType: OntologyClass
hasQuantitativeValue: [QuantityValue]
hasQualitativeValue: NamedThing
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
subclassOf: [IriType]
}
type ClinicalTrial
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
}
type CodingSequence
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
molecularlyInteractsWith: [MolecularEntity]
affectsAbundanceOf: [MolecularEntity]
increasesAbundanceOf: [MolecularEntity]
decreasesAbundanceOf: [MolecularEntity]
affectsActivityOf: [MolecularEntity]
increasesActivityOf: [MolecularEntity]
decreasesActivityOf: [MolecularEntity]
affectsExpressionOf: [GenomicEntity]
increasesExpressionOf: [GenomicEntity]
decreasesExpressionOf: [GenomicEntity]
affectsFoldingOf: [MolecularEntity]
increasesFoldingOf: [MolecularEntity]
decreasesFoldingOf: [MolecularEntity]
affectsLocalizationOf: [MolecularEntity]
increasesLocalizationOf: [MolecularEntity]
decreasesLocalizationOf: [MolecularEntity]
affectsMetabolicProcessingOf: [MolecularEntity]
increasesMetabolicProcessingOf: [MolecularEntity]
decreasesMetabolicProcessingOf: [MolecularEntity]
affectsMolecularModificationOf: [MolecularEntity]
increasesMolecularModificationOf: [MolecularEntity]
decreasesMolecularModificationOf: [MolecularEntity]
affectsSynthesisOf: [MolecularEntity]
increasesSynthesisOf: [MolecularEntity]
decreasesSynthesisOf: [MolecularEntity]
affectsDegradationOf: [MolecularEntity]
increasesDegradationOf: [MolecularEntity]
decreasesDegradationOf: [MolecularEntity]
affectsMutationRateOf: [GenomicEntity]
increasesMutationRateOf: [GenomicEntity]
decreasesMutationRateOf: [GenomicEntity]
affectsResponseTo: [MolecularEntity]
increasesResponseTo: [MolecularEntity]
decreasesResponseTo: [MolecularEntity]
affectsSplicingOf: [Transcript]
increasesSplicingOf: [Transcript]
decreasesSplicingOf: [Transcript]
affectsStabilityOf: [MolecularEntity]
increasesStabilityOf: [MolecularEntity]
decreasesStabilityOf: [MolecularEntity]
affectsTransportOf: [MolecularEntity]
increasesTransportOf: [MolecularEntity]
decreasesTransportOf: [MolecularEntity]
affectsSecretionOf: [MolecularEntity]
increasesSecretionOf: [MolecularEntity]
decreasesSecretionOf: [MolecularEntity]
affectsUptakeOf: [MolecularEntity]
increasesUptakeOf: [MolecularEntity]
decreasesUptakeOf: [MolecularEntity]
regulatesEntityToEntity: [MolecularEntity]
biomarkerFor: [DiseaseOrPhenotypicFeature]
inTaxon: [OrganismTaxon]
hasBiologicalSequence: BiologicalSequence
}
type ConfidenceLevel
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
}
type DataFile
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
}
type DataSet
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
}
interface DataSetSummary
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
title: String
sourceDataFile: DataFile
versionOf: DataSet
type: String
distribution: DistributionLevel
sourceWebPage: String
}
type DataSetVersion
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
title: String
sourceDataFile: DataFile
versionOf: DataSet
type: String
distribution: DistributionLevel
}
type Device
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
}
type Disease
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
correlatedWith: [MolecularEntity]
hasBiomarker: [MolecularEntity]
treatedBy: [NamedThing]
inTaxon: [OrganismTaxon]
}
type DiseaseOrPhenotypicFeature implements ThingWithTaxon
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
correlatedWith: [MolecularEntity]
hasBiomarker: [MolecularEntity]
treatedBy: [NamedThing]
inTaxon: [OrganismTaxon]
}
type DiseaseOrPhenotypicFeatureAssociationToLocationAssociation
{
subject: DiseaseOrPhenotypicFeature!
relation: Uriorcurie!
object: AnatomicalEntity!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
interface DiseaseOrPhenotypicFeatureAssociationToThingAssociation
{
subject: DiseaseOrPhenotypicFeature!
relation: Uriorcurie!
object: NamedThing!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
type DiseaseToPhenotypicFeatureAssociation implements EntityToPhenotypicFeatureAssociation, DiseaseToThingAssociation
{
subject: NamedThing!
relation: Uriorcurie!
object: NamedThing!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
sexQualifier: BiologicalSex
frequencyQualifier: FrequencyValue
severityQualifier: SeverityValue
onsetQualifier: Onset
}
interface DiseaseToThingAssociation
{
subject: Disease!
relation: Uriorcurie!
object: NamedThing!
id: Nodeidentifier!
negated: Boolean
associationType: OntologyClass
qualifiers: [OntologyClass]
publications: [Publication]
providedBy: Provider
associationSlot: String
edgeLabel: LabelType!
}
interface DistributionLevel
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
title: String
sourceDataFile: DataFile
versionOf: DataSet
type: String
distribution: DistributionLevel
downloadURL: String
}
type Drug
{
id: IdentifierType!
name: LabelType!
category: [IriType]!
relatedTo: [NamedThing]
interactsWith: [NamedThing]
nodeProperty: String
iri: IriType
synonym: [LabelType]
fullName: LabelType
description: NarrativeText
systematicSynonym: [LabelType]
hasPhenotype: [PhenotypicFeature]
molecularlyInteractsWith: [MolecularEntity]
affectsAbundanceOf: [MolecularEntity]
increasesAbundanceOf: [MolecularEntity]
decreasesAbundanceOf: [MolecularEntity]
affectsActivityOf: [MolecularEntity]
increasesActivityOf: [MolecularEntity]
decreasesActivityOf: [MolecularEntity]
affectsExpressionOf: [GenomicEntity]
increasesExpressionOf: [GenomicEntity]
decreasesExpressionOf: [GenomicEntity]
affectsFoldingOf: [MolecularEntity]
increasesFoldingOf: [MolecularEntity]
decreasesFoldingOf: [MolecularEntity]
affectsLocalizationOf: [MolecularEntity]
increasesLocalizationOf: [MolecularEntity]
decreasesLocalizationOf: [MolecularEntity]
affectsMetabolicProcessingOf: [MolecularEntity]
increasesMetabolicProcessingOf: [MolecularEntity]
decreasesMetabolicProcessingOf: [MolecularEntity]
affectsMolecularModificationOf: [MolecularEntity]
increasesMolecularModificationOf: [MolecularEntity]
decreasesMolecularModificationOf: [MolecularEntity]
affectsSynthesisOf: [MolecularEntity]
increasesSynthesisOf: [MolecularEntity]
decreasesSynthesisOf: [MolecularEntity]
affectsDegradationOf: [MolecularEntity]
increasesDegradationOf: [MolecularEntity]
decreasesDegradationOf: [MolecularEntity]
affectsMutationRateOf: [GenomicEntity]
increasesMutationRateOf: [GenomicEntity]
decreasesMutationRateOf: [GenomicEntity]
affectsResponseTo: [MolecularEntity]
increasesResponseTo: [MolecularEntity]
decreasesResponseTo: [MolecularEntity]
affectsSplicingOf: [Transcript]
increasesSplicingOf: [Transcript]
decreasesSplicingOf: [Transcript]
affectsStabilityOf: [MolecularEntity]
increasesStabilityOf: [MolecularEntity]
decreasesStabilityOf: [MolecularEntity]
affectsTransportOf: [MolecularEntity]