Example models

Circadian clock

Code: circadian_clock
Paper: :cite:p:`Leloup7051`

G1/S transition

Code: g1s_transition
Paper: :cite:p:`barr2016dynamical`

Immediate-early gene response

Code: Nakakuki_Cell_2010
Paper: :cite:p:`NAKAKUKI2010884`

Insulin signaling

Code: insulin_signaling
Paper: :cite:p:`KUBOTA2012820`

MAPK cascade

Code: mapk_cascade
Paper: :cite:p:`https://doi.org/10.1046/j.1432-1327.2000.01197.x`

NF-κB pathway

Code: nfkb_pathway
Paper: :cite:p:`oppelt2018model`

pan-RTK

Code: pan_rtk
Paper: :cite:p:`hass2017predicting`

Proliferation-quiescence decision

Code: prolif_quies
Paper: :cite:p:`heldt2018comprehensive`

TGF-β/SMAD pathway

Code: tgfb_smad
Paper: :cite:p:`LUCARELLI201875`