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issue with space in the read name in fastq.gz file for bowtie2 #99

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hxin opened this issue May 22, 2019 · 2 comments
Open

issue with space in the read name in fastq.gz file for bowtie2 #99

hxin opened this issue May 22, 2019 · 2 comments
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hxin commented May 22, 2019

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hxin commented May 22, 2019

check bismark --icpc option

@hxin hxin self-assigned this May 22, 2019
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hxin commented May 22, 2019

try to repeat the bowtie error when running against chipseq data, where there is space in the read name.

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