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DESCRIPTION
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DESCRIPTION
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Package: BPCells
Title: Single Cell Counts Matrices to PCA
Version: 0.1.0
Authors@R:
person(given = "Benjamin",
family = "Parks",
role = c("aut", "cre"),
email = "bparks@stanford.edu",
comment = c(ORCID = "0000-0002-0261-7472"))
Description: > Efficient operations for single cell ATAC-seq fragments and
RNA counts matrices. Interoperable with standard file formats, and introduces
efficient bit-packed formats that allow large storage savings and increased
read speeds.
License: MIT
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.1
Roxygen: list(markdown = TRUE)
URL: https://bnprks.github.io/BPCells, https://github.com/bnprks/BPCells
LinkingTo:
Rcpp,
RcppEigen
Imports:
methods,
grDevices,
magrittr,
Matrix,
Rcpp,
rlang,
vctrs,
stringr,
tibble,
dplyr,
tidyr,
ggplot2,
scales,
patchwork,
scattermore,
ggrepel,
RColorBrewer,
hexbin
Suggests:
IRanges,
GenomicRanges,
matrixStats
Depends:
R (>= 2.10)