Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

glibc incompatible #41

Closed
GracaP88 opened this issue Jan 3, 2023 · 3 comments
Closed

glibc incompatible #41

GracaP88 opened this issue Jan 3, 2023 · 3 comments

Comments

@GracaP88
Copy link

GracaP88 commented Jan 3, 2023

I am trying to install Phigaro using the code: conda install -c bioconda phigaro

However, I get this error. Can you help me?

Output in format: Requested package -> Available versionsThe following specifications were found to be incompatible with your system:

  • feature:/linux-64::__glibc==2.35=0
  • feature:|@/linux-64::__glibc==2.35=0

Your installed version is: 2.35

@PollyTikhonova
Copy link
Collaborator

Dear @GracaP88, are you installing phigaro to a new clean environment? If not, please, try to create a new clean environment and install Phigaro. I've just tried it on my linux machine and did not bumped into eny errors. If it's still not working, could you please the conda version you are using?

@GracaP88
Copy link
Author

GracaP88 commented Jan 5, 2023

Thanks for answering,

I was able to install Phigaro using "pip install phigaro" in my base environment. Nevertheless to run it I had to perform the downgrade of pandas to 1.2.0

For the conda installation I was not able to resolve the problem even in clean environment...

@aforestsomewhere
Copy link

Thanks Graca, I also encountered the glibc error above (slightly older HPC setup) but the instructions outlined worked (conda create -n phigaro_env python=3.7 pip -> conda activate phigaro_env -> pip install phigaro -> pip install pandas==1.2.0)

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

3 participants