Update msprime to 1.3.1

bodkan · Feb 21, 2024 · dcb83d5 · dcb83d5
1 parent a4a2298
commit dcb83d5
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Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
@@ -176,7 +176,7 @@ jobs:
         run: |
           install.packages("reticulate", repos = "http://cran.rstudio.com")
           reticulate::install_miniconda()
-          deps <- c("msprime==1.3.0", "tskit==0.5.6", "pyslim==1.0.4")
+          deps <- c("msprime==1.3.1", "tskit==0.5.6", "pyslim==1.0.4")
           PYTHON_ENV <- paste0("Python-3.12_", paste(gsub("==", "-", c(deps, "tspop==0.0.2")), collapse = "_"))
           reticulate::conda_create(envname = PYTHON_ENV, python_version = '3.11')
           reticulate::use_condaenv(PYTHON_ENV, required = TRUE)

diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
@@ -96,7 +96,7 @@ jobs:
         run: |
           install.packages("reticulate", repos = "http://cran.rstudio.com")
           reticulate::install_miniconda()
-          deps <- c("msprime==1.3.0", "tskit==0.5.6", "pyslim==1.0.4")
+          deps <- c("msprime==1.3.1", "tskit==0.5.6", "pyslim==1.0.4")
           PYTHON_ENV <- paste0("Python-3.12_", paste(gsub("==", "-", c(deps, "tspop==0.0.2")), collapse = "_"))
           reticulate::conda_create(envname = PYTHON_ENV, python_version = '3.11')
           reticulate::use_condaenv(PYTHON_ENV, required = TRUE)

diff --git a/R/zzz.R b/R/zzz.R
@@ -10,7 +10,7 @@ tspop <- NULL
 # define slendr's required Python dependencies and compose an environment name
 # that will be used specifically for them
 PYTHON_ENV <-
-  c("msprime==1.3.0", "tskit==0.5.6", "pyslim==1.0.4", "tspop==0.0.2") %>%
+  c("msprime==1.3.1", "tskit==0.5.6", "pyslim==1.0.4", "tspop==0.0.2") %>%
   gsub("==", "-", .) %>%
   paste(collapse = "_") %>%
   paste0("Python-3.12_", .)