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@CamaraLab

Cámara Lab

The Cámara lab focuses on the development and application of innovative computational approaches to the study of cellular heterogeneity and its role in disease.

Popular repositories

  1. scTDA scTDA Public

    An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data

    Python 49 21

  2. STvEA STvEA Public

    Spatially-resolved Transcriptomics via Epitope Anchoring

    R 16 4

  3. RayleighSelection RayleighSelection Public

    An R package for feature selection in topological spaces.

    R 10 3

  4. CAJAL CAJAL Public

    A Python package using Gromov-Wasserstein distance to compare cell shapes

    Python 10 3

  5. TDA-TCGA TDA-TCGA Public

    R package for the identification of cancer-associated mutated genes using gene expression and mutation data.

    R 8 4

  6. ConDecon ConDecon Public

    R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA-seq data.

    R 7

Repositories

Showing 10 of 11 repositories
  • 0 MIT 0 0 0 Updated May 15, 2024
  • CAJAL Public

    A Python package using Gromov-Wasserstein distance to compare cell shapes

    Python 10 MIT 3 0 0 Updated May 13, 2024
  • STvEA Public

    Spatially-resolved Transcriptomics via Epitope Anchoring

    R 16 GPL-3.0 4 1 0 Updated Apr 1, 2024
  • ConDecon Public

    R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA-seq data.

    R 7 MIT 0 0 0 Updated Apr 1, 2024
  • R 0 1 0 0 Updated Oct 26, 2022
  • EPN_Classifier Public

    EPNClassifier assigns ependymal tumors profiled by bulk transcriptomics (RNA-seq or microarrays) into molecular subgroups.

    R 0 GPL-3.0 0 0 0 Updated Jun 2, 2022
  • TDA-TCGA Public

    R package for the identification of cancer-associated mutated genes using gene expression and mutation data.

    R 8 GPL-3.0 4 0 0 Updated Oct 29, 2021
  • RayleighSelection Public

    An R package for feature selection in topological spaces.

    R 10 MIT 3 0 0 Updated Aug 12, 2021
  • AdjacencyScore Public

    R package assessing co-localization of features in a graph

    R 1 0 0 0 Updated May 19, 2021
  • scTDA Public

    An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data

    Python 49 GPL-3.0 21 4 1 Updated Jul 12, 2018

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