README.md

multiple-streak-inhibition

Solving a system of ODEs to model interactions preventing the formation of multiple streaks

Quickstart

Code has been tested with Python 3.12.2. Please note that the creation of the animated output requires ffmpeg to be installed, which can be found at the FFmpeg website.

Download code

git clone https://github.com/catohaste/multiple-streak-inhibition.git
cd multiple-streak-inhibition

Create and activate virtual environments with all required packages

python3 -m venv env
source env/bin/activate
python -m pip install -r requirements.txt

Run files

python intact_embryo.py
python make_cut.py