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Plots derived from proteinGroups.txt (like the PCA plot) currently do not benefit from shortened Raw file names (via ), since experimental groups not necessarily correspond 1:1 to Raw files (its a n:m mapping).
We could, however, obtain the mapping from evidence.txt ('raw file' and 'experiment' column) and allow for manual editing in the report_v0.xyz_filename_sort.txt by adding three more columns
experiment (original)
experiment (short/display) <-- editable
experiment (best effort)
The text was updated successfully, but these errors were encountered:
cbielow
changed the title
Allow manual shorting of experimental names for PG plots
[IDEA] Allow manual shorting of experimental names for PG plots
Nov 15, 2023
(mentioned in #25)
Plots derived from proteinGroups.txt (like the PCA plot) currently do not benefit from shortened Raw file names (via ), since experimental groups not necessarily correspond 1:1 to Raw files (its a n:m mapping).
We could, however, obtain the mapping from evidence.txt ('raw file' and 'experiment' column) and allow for manual editing in the
report_v0.xyz_filename_sort.txt
by adding three more columnsThe text was updated successfully, but these errors were encountered: