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wordsegnet.go
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wordsegnet.go
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// Copyright (c) 2019, The Emergent Authors. All rights reserved.
// Use of this source code is governed by a BSD-style
// license that can be found in the LICENSE file.
// network from job 2150
package main
import (
"fmt"
//"github.com/emer/leabra/leabra"
"log"
"github.com/emer/emergent/emer"
"github.com/emer/emergent/params"
"github.com/emer/emergent/prjn"
"github.com/emer/emergent/relpos"
"github.com/emer/etable/etable"
"github.com/emer/leabra/deep"
)
// WordNet encapsulates the network configuration
type WordNet struct {
Net *deep.Network `view:"no-inline" desc:"the network -- click to view / edit parameters for layers, prjns, etc"`
Pats *etable.Table `view:"no-inline" desc:"the training patterns to use"`
Params params.Sets `view:"no-inline" desc:"full collection of param sets"`
ParamSet string `desc:"which set of *additional* parameters to use -- always applies Base and optionaly this next if set"`
LogSetParams bool `view:"-" desc:"if true, print message for all params that are set"`
SuperLays []string `interactive:"-" desc:"superficial layer names"`
HidLays []string `interactive:"-" desc:"superficial layer names"`
TRCLays []string `interactive:"+" desc:"TRC layer names"`
// Projections
Topo22Skp11Prjn *prjn.PoolTile `view:"-" desc:"feedforward topo prjn 2x by 2y, skip 1x, skip 1y"`
Topo22Skp11PrjnRecip *prjn.PoolTile `view:"-" desc:"topo reciprocal projection"`
Topo23Skp12Prjn *prjn.PoolTile `view:"-" desc:"feedforward topo prjn 2x by 3y, skip 1x, skip 2y"`
Topo23Skp12PrjnRecip *prjn.PoolTile `view:"-" desc:"topo reciprocal projection"`
Topo33Skp22Prjn *prjn.PoolTile `view:"-" desc:"feedforward topo prjn 3x by 3y, skip 2x 2y"`
Topo33Skp22PrjnRecip *prjn.PoolTile `view:"-" desc:"topo reciprocal projection"`
Topo33Skp21Prjn *prjn.PoolTile `view:"-" desc:"feedforward topo prjn 3x by 3y, skip 2x 1y"`
Topo33Skp21PrjnRecip *prjn.PoolTile `view:"-" desc:"topo reciprocal projection"`
Topo33Skp12Prjn *prjn.PoolTile `view:"-" desc:"feedforward topo prjn 3x by 2y, skip 1x 2y"`
Topo33Skp12PrjnRecip *prjn.PoolTile `view:"-" desc:"topo reciprocal projection"`
Topo32Skp21Prjn *prjn.PoolTile `view:"-" desc:"feedforward topo prjn 3x by 2y, skip 2x 1y"`
Topo32Skp21PrjnRecip *prjn.PoolTile `view:"-" desc:"topo reciprocal projection"`
Topo32Skp11Prjn *prjn.PoolTile `view:"-" desc:"feedforward topo prjn 3x by 2y, skip 1x 1y"`
Topo32Skp11PrjnRecip *prjn.PoolTile `view:"-" desc:"topo reciprocal projection"`
Topo32Skp01Prjn *prjn.PoolTile `view:"-" desc:"feedforward topo prjn 3x by 1y, skip 0x 1y"`
Topo32Skp01PrjnRecip *prjn.PoolTile `view:"-" desc:"topo reciprocal projection"`
}
// New creates new blank elements and initializes defaults
func NewWordNet() *WordNet {
wn := WordNet{}
wn.Net = &deep.Network{}
wn.NewPrjns()
wn.Params = ParamSets
return &wn
}
// NewPrjns creates new projections
func (wn *WordNet) NewPrjns() {
wn.Topo22Skp11Prjn = prjn.NewPoolTile()
wn.Topo22Skp11Prjn.Wrap = false
wn.Topo22Skp11Prjn.Size.Set(2, 2)
wn.Topo22Skp11Prjn.Skip.Set(1, 1)
wn.Topo22Skp11Prjn.Start.Set(0, 0)
wn.Topo22Skp11Prjn.TopoRange.Min = 0.8
wn.Topo22Skp11PrjnRecip = prjn.NewPoolTileRecip(wn.Topo22Skp11Prjn)
wn.Topo22Skp11PrjnRecip.TopoRange.Min = 0.8
wn.Topo23Skp12Prjn = prjn.NewPoolTile()
wn.Topo23Skp12Prjn.Wrap = false
wn.Topo23Skp12Prjn.Size.Set(2, 3)
wn.Topo23Skp12Prjn.Skip.Set(1, 2)
wn.Topo23Skp12Prjn.Start.Set(0, -1)
wn.Topo23Skp12Prjn.TopoRange.Min = 0.8
wn.Topo23Skp12PrjnRecip = prjn.NewPoolTileRecip(wn.Topo23Skp12Prjn)
wn.Topo23Skp12PrjnRecip.TopoRange.Min = 0.8
wn.Topo32Skp11Prjn = prjn.NewPoolTile()
wn.Topo32Skp11Prjn.Wrap = false
wn.Topo32Skp11Prjn.Size.Set(3, 2)
wn.Topo32Skp11Prjn.Skip.Set(1, 1)
wn.Topo32Skp11Prjn.Start.Set(0, 0)
wn.Topo32Skp11Prjn.TopoRange.Min = 0.8
wn.Topo32Skp11PrjnRecip = prjn.NewPoolTileRecip(wn.Topo32Skp11Prjn)
wn.Topo32Skp11PrjnRecip.TopoRange.Min = 0.8
wn.Topo32Skp21Prjn = prjn.NewPoolTile()
wn.Topo32Skp21Prjn.Wrap = false
wn.Topo32Skp21Prjn.Size.Set(3, 2)
wn.Topo32Skp21Prjn.Skip.Set(2, 1)
wn.Topo32Skp21Prjn.Start.Set(0, 0)
wn.Topo32Skp21Prjn.TopoRange.Min = 0.8
wn.Topo32Skp21PrjnRecip = prjn.NewPoolTileRecip(wn.Topo32Skp21Prjn)
wn.Topo32Skp21PrjnRecip.TopoRange.Min = 0.8
wn.Topo33Skp12Prjn = prjn.NewPoolTile()
wn.Topo33Skp12Prjn.Wrap = false
wn.Topo33Skp12Prjn.Size.Set(3, 3)
wn.Topo33Skp12Prjn.Skip.Set(1, 2)
wn.Topo33Skp12Prjn.Start.Set(0, 0)
wn.Topo33Skp12Prjn.TopoRange.Min = 0.8
wn.Topo33Skp12PrjnRecip = prjn.NewPoolTileRecip(wn.Topo33Skp12Prjn)
wn.Topo33Skp12PrjnRecip.TopoRange.Min = 0.8
wn.Topo33Skp21Prjn = prjn.NewPoolTile()
wn.Topo33Skp21Prjn.Wrap = false
wn.Topo33Skp21Prjn.Size.Set(3, 3)
wn.Topo33Skp21Prjn.Skip.Set(2, 1)
wn.Topo33Skp21Prjn.Start.Set(0, -1)
wn.Topo33Skp21Prjn.TopoRange.Min = 0.8
wn.Topo33Skp21PrjnRecip = prjn.NewPoolTileRecip(wn.Topo33Skp21Prjn)
wn.Topo33Skp21PrjnRecip.TopoRange.Min = 0.8
wn.Topo33Skp22Prjn = prjn.NewPoolTile()
wn.Topo33Skp22Prjn.Wrap = false
wn.Topo33Skp22Prjn.Size.Set(3, 3)
wn.Topo33Skp22Prjn.Skip.Set(2, 2)
wn.Topo33Skp22Prjn.Start.Set(0, 0)
wn.Topo33Skp22Prjn.TopoRange.Min = 0.8
wn.Topo33Skp22PrjnRecip = prjn.NewPoolTileRecip(wn.Topo33Skp22Prjn)
wn.Topo33Skp22PrjnRecip.TopoRange.Min = 0.8
wn.Topo32Skp01Prjn = prjn.NewPoolTile()
wn.Topo32Skp01Prjn.Wrap = false
wn.Topo32Skp01Prjn.Size.Set(3, 2)
wn.Topo32Skp01Prjn.Skip.Set(0, 1)
wn.Topo32Skp01Prjn.Start.Set(0, 0)
wn.Topo32Skp01Prjn.TopoRange.Min = 0.8
wn.Topo32Skp01PrjnRecip = prjn.NewPoolTileRecip(wn.Topo32Skp01Prjn)
wn.Topo32Skp01PrjnRecip.TopoRange.Min = 0.8
}
func (wn *WordNet) Config() {
net := wn.Net
net.InitName(net, "WordSeg")
// primary auditory
a1s := net.AddLayer4D("A1", 12, 6, 2, 7, emer.Input)
a1s.SetClass("A1")
rs := net.AddLayer4D("R", 12, 6, 2, 7, emer.Input)
rs.SetClass("R")
one2one := prjn.NewOneToOne()
pOne2One := prjn.NewPoolOneToOne()
// belt (B)
cbs, cbct, cbth := net.AddDeep4D("CB", 5, 4, 5, 5)
cbth.Shape().SetShape([]int{5, 4, 2, 7}, nil, nil)
cbth.(*deep.TRCLayer).Drivers.Add("A1")
cbs.SetClass("CB")
cbct.SetClass("CB")
cbth.SetClass("CB")
cbct.RecvPrjns().SendName("CB").SetPattern(one2one)
cbct.RecvPrjns().SendName("CB").SetClass("ToCT1to1")
cbth.SetName("CBTh")
rbs, rbct, rbth := net.AddDeep4D("RB", 5, 4, 5, 5)
rbth.Shape().SetShape([]int{5, 4, 2, 7}, nil, nil)
rbth.(*deep.TRCLayer).Drivers.Add("R")
rbs.SetClass("RB")
rbct.SetClass("RB")
rbth.SetClass("RB")
rbct.RecvPrjns().SendName("RB").SetPattern(one2one)
rbct.RecvPrjns().SendName("RB").SetClass("ToCT1to1")
rbth.SetName("RBTh")
// parabelt (PB)
cpbs, cpbct, cpbth := net.AddDeep4D("CPB", 5, 3, 5, 5)
cpbth.Shape().SetShape([]int{5, 3, 2, 7}, nil, nil)
cpbth.(*deep.TRCLayer).Drivers.Add("A1")
cpbs.SetClass("CPB")
cpbct.SetClass("CPBCT")
cpbth.SetClass("CPBTH")
cpbct.RecvPrjns().SendName("CPB").SetPattern(one2one)
cpbct.RecvPrjns().SendName("CPB").SetClass("ToCT1to1")
cpbth.SetName("CPBTh")
rpbs, rpbct, rpbth := net.AddDeep4D("RPB", 5, 3, 5, 5)
rpbth.Shape().SetShape([]int{5, 3, 2, 7}, nil, nil)
rpbth.(*deep.TRCLayer).Drivers.Add("R")
rpbs.SetClass("RPB")
rpbct.SetClass("RPBCT")
rpbth.SetClass("RPBTH")
rpbct.RecvPrjns().SendName("RPB").SetPattern(one2one)
rpbct.RecvPrjns().SendName("RPB").SetClass("ToCT1to1")
rpbth.SetName("RPBTh")
// superior temporal
stss, stsct, ststh := net.AddDeep4D("STS", 5, 3, 6, 6)
ststh.Shape().SetShape([]int{5, 3, 4, 7}, nil, nil)
ststh.(*deep.TRCLayer).Drivers.Add("A1", "R")
stss.SetClass("STS")
stsct.SetClass("STSCT")
ststh.SetClass("STSTH")
stsct.RecvPrjns().SendName("STS").SetPattern(one2one)
stsct.RecvPrjns().SendName("STS").SetClass("ToCT1to1")
ststh.SetName("STSTh")
a1s.SetRelPos(relpos.Rel{Scale: 1.0})
rs.SetRelPos(relpos.Rel{Rel: relpos.LeftOf, Other: "A1", XAlign: relpos.Left, Space: 10, Scale: 1.0})
cbs.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "A1", XAlign: relpos.Left, Space: 50})
cbct.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "CB", XAlign: relpos.Left, Space: 20})
cbth.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "CBCT", XAlign: relpos.Left, Space: 20, Scale: 1})
rbs.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "R", XAlign: relpos.Left, Space: 50})
rbct.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "RB", XAlign: relpos.Left, Space: 20})
rbth.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "RBCT", XAlign: relpos.Left, Space: 20, Scale: 1})
cpbs.SetRelPos(relpos.Rel{Rel: relpos.Above, Other: "A1", XAlign: relpos.Left, YAlign: relpos.Front})
cpbct.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "CPB", XAlign: relpos.Left, Space: 20, Scale: 1.0})
cpbth.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "CPBCT", XAlign: relpos.Left, Space: 20, Scale: 1.0})
rpbs.SetRelPos(relpos.Rel{Rel: relpos.LeftOf, Other: "CPB", XAlign: relpos.Left, Space: 10, Scale: 1.0})
rpbct.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "RPB", XAlign: relpos.Left, Space: 20, Scale: 1.0})
rpbth.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "RPBCT", XAlign: relpos.Left, Space: 20, Scale: 1.0})
stss.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "RPBTh", XAlign: relpos.Left, Space: 20, Scale: 1.0})
stsct.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "STS", XAlign: relpos.Left, Space: 20, Scale: 1.0})
ststh.SetRelPos(relpos.Rel{Rel: relpos.Behind, Other: "STSCT", XAlign: relpos.Left, Space: 20, Scale: 1.0})
// primary to belt
net.ConnectLayers(a1s, cbs, wn.Topo33Skp12Prjn, emer.Forward).SetClass("FwdStd")
net.ConnectLayers(rs, rbs, wn.Topo33Skp12Prjn, emer.Forward).SetClass("FwdStd")
net.ConnectLayers(a1s, rbs, wn.Topo33Skp12Prjn, emer.Forward).SetClass("A1ToRB")
// superficial belt to parabelt
net.ConnectLayers(cbs, cpbs, wn.Topo22Skp11Prjn, emer.Forward).SetClass("FwdStd")
net.ConnectLayers(rbs, rpbs, wn.Topo22Skp11Prjn, emer.Forward).SetClass("FwdStd")
// superficial parabelt to belt
net.ConnectLayers(cpbs, cbs, wn.Topo22Skp11PrjnRecip, emer.Back).SetClass("Back")
net.ConnectLayers(rpbs, rbs, wn.Topo22Skp11PrjnRecip, emer.Back).SetClass("Back")
// ct parabelt to ct belt
net.ConnectLayers(cpbct, cbct, wn.Topo22Skp11PrjnRecip, emer.Back).SetClass("BackStrong")
net.ConnectLayers(rpbct, rbct, wn.Topo22Skp11PrjnRecip, emer.Back).SetClass("BackStrong")
// ct parabelt to sts thalamic
net.ConnectLayers(rpbct, ststh, wn.Topo22Skp11Prjn, emer.Forward).SetClass("FwdToPulv")
net.ConnectLayers(cpbct, ststh, wn.Topo22Skp11Prjn, emer.Forward).SetClass("FwdToPulv") // ct parabelt to thalamic belt
net.ConnectLayers(cpbct, cbth, wn.Topo32Skp11PrjnRecip, emer.Back).SetClass("BackToPulv")
net.ConnectLayers(rpbct, rbth, wn.Topo32Skp11PrjnRecip, emer.Back).SetClass("BackToPulv")
//ct sts to ct pb
net.ConnectLayers(stsct, cpbct, wn.Topo22Skp11PrjnRecip, emer.Back).SetClass("BackWeak")
net.ConnectLayers(stsct, rpbct, wn.Topo22Skp11PrjnRecip, emer.Back).SetClass("BackWeak")
// ct sts to thalamic parabelt
net.ConnectLayers(stsct, cpbth, wn.Topo22Skp11PrjnRecip, emer.Back).SetClass("BackToPulv") // this helps
net.ConnectLayers(stsct, rpbth, wn.Topo22Skp11PrjnRecip, emer.Back).SetClass("BackToPulv") // this helps
// superficial parabelt to ct belt
net.ConnectLayers(cpbs, cbct, wn.Topo22Skp11PrjnRecip, emer.Back).SetClass("BackMax")
net.ConnectLayers(rpbs, rbct, wn.Topo22Skp11PrjnRecip, emer.Back).SetClass("BackMax")
// caudal to rostral superficial
net.ConnectLayers(cbs, rbs, wn.Topo32Skp01Prjn, emer.Forward).SetClass("FwdStrong")
net.ConnectLayers(cpbs, rpbs, wn.Topo32Skp01Prjn, emer.Forward).SetClass("FwdStrong")
// rostral to caudal superficial
net.ConnectLayers(rbs, cbs, wn.Topo32Skp01Prjn, emer.Forward).SetClass("BackWeak")
net.ConnectLayers(rpbs, cpbs, wn.Topo32Skp01Prjn, emer.Forward).SetClass("BackWeak")
// superficial parabelt to superficial sts
net.ConnectLayers(cpbs, stss, wn.Topo32Skp01Prjn, emer.Forward).SetClass("FwdMedium")
net.ConnectLayers(rpbs, stss, wn.Topo32Skp01Prjn, emer.Forward).SetClass("FwdMedium")
// superficial sts to superficial parabelt
net.ConnectLayers(stss, cpbs, wn.Topo32Skp01Prjn, emer.Back).SetClass("BackWeak")
net.ConnectLayers(stss, rpbs, wn.Topo32Skp01Prjn, emer.Back).SetClass("BackWeak")
net.ConnectCtxtToCT(cbct, cbct, wn.Topo22Skp11PrjnRecip).SetClass("CTSelfBelt")
net.ConnectCtxtToCT(cpbct, cpbct, wn.Topo22Skp11PrjnRecip).SetClass("CTSelfParaBelt")
net.ConnectCtxtToCT(rbct, rbct, wn.Topo22Skp11PrjnRecip).SetClass("CTSelfBelt")
net.ConnectCtxtToCT(rpbct, rpbct, wn.Topo22Skp11PrjnRecip).SetClass("CTSelfParaBelt")
net.ConnectCtxtToCT(stsct, stsct, pOne2One).SetClass("CTSelfSTS")
sameu := prjn.NewPoolSameUnit()
sameu.SelfCon = false
net.ConnectLayers(cbs, cbs, sameu, emer.Lateral)
net.ConnectLayers(rbs, rbs, sameu, emer.Lateral)
net.ConnectLayers(cpbs, cpbs, sameu, emer.Lateral)
net.ConnectLayers(rpbs, rpbs, sameu, emer.Lateral)
net.ConnectLayers(stss, stss, sameu, emer.Lateral)
wn.TRCLays = make([]string, 0, 10)
nl := wn.Net.NLayers()
for li := 0; li < nl; li++ {
ly := wn.Net.Layer(li)
if ly.Type() == deep.TRC {
wn.TRCLays = append(wn.TRCLays, ly.Name())
}
}
net.Defaults()
wn.SetParams("Network", wn.LogSetParams) // only set Network params
err := net.Build()
if err != nil {
log.Println(err)
return
}
//ar := net.ThreadAlloc(4) // must be done after build
//ar := net.ThreadReport() // hand tuning now..
//mpi.Printf("%s", ar)
a1s.SetThread(0)
cbs.SetThread(0)
cbct.SetThread(0)
cbth.SetThread(0)
cpbs.SetThread(0)
cpbct.SetThread(0)
cpbth.SetThread(0)
rs.SetThread(1)
rbs.SetThread(1)
rbct.SetThread(1)
rbth.SetThread(1)
rpbs.SetThread(1)
rpbct.SetThread(1)
rpbth.SetThread(1)
stss.SetThread(0)
stsct.SetThread(0) // split sts
ststh.SetThread(0)
net.InitTopoScales()
wn.Net.InitWts()
}
/////////////////////////////////////////////////////////////////////////
// Params setting
// ParamsName returns name of current set of parameters
func (wn *WordNet) ParamsName() string {
if wn.ParamSet == "" {
return "Base"
}
return wn.ParamSet
}
// SetParams sets the params for "Base" and then current ParamSet.
// If sheet is empty, then it applies all avail sheets (e.g., Network, Sim)
// otherwise just the named sheet
// if setMsg = true then we output a message for each param that was set.
func (wn *WordNet) SetParams(sheet string, setMsg bool) error {
if sheet == "" {
// this is important for catching typos and ensuring that all sheets can be used
wn.Params.ValidateSheets([]string{"Network", "Sim"})
}
err := wn.SetParamsSet("Base", sheet, setMsg)
if wn.ParamSet != "" && wn.ParamSet != "Base" {
err = wn.SetParamsSet(wn.ParamSet, sheet, setMsg)
if err == nil {
fmt.Printf("Using ParamSet: %s\n", wn.ParamSet)
}
}
return err
}
// SetParamsSet sets the params for given params.Set name.
// If sheet is empty, then it applies all avail sheets (e.g., Network, Sim)
// otherwise just the named sheet
// if setMsg = true then we output a message for each param that was set.
func (wn *WordNet) SetParamsSet(setNm string, sheet string, setMsg bool) error {
pset, err := wn.Params.SetByNameTry(setNm)
if err != nil {
return err
}
if sheet == "" || sheet == "Network" {
netp, ok := pset.Sheets["Network"]
if ok {
wn.Net.ApplyParams(netp, setMsg)
}
}
if sheet == "" || sheet == "Sim" {
simp, ok := pset.Sheets["Sim"]
if ok {
simp.Apply(wn, setMsg)
}
}
// note: if you have more complex environments with parameters, definitely add
// sheets for them, e.g., "TrainEnv", "TestEnv" etc
return err
}