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Utilizing pandoc #5

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vymao opened this issue Apr 18, 2020 · 1 comment
Open

Utilizing pandoc #5

vymao opened this issue Apr 18, 2020 · 1 comment
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@vymao
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vymao commented Apr 18, 2020 •
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Hi,

I noticed that FIREVAT depends on pandoc for creating figures, of which there does not seem to be an easy way to manually install. Is FIREVAT runnable from an R command line instance; if so, what version of R should we use, since pandocs doesn't seem available for R above R/3.2.5? Or is RStudio required?
@khb7840 khb7840 added the question Further information is requested label May 25, 2020
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khb7840 commented May 25, 2020 •
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I apologize for the late response. FIREVAT import "Rmarkdown" library (which converts .Rmd to html with "pandoc") during report generation step. If you have some problem with pandoc, I think you can skip
report generation step with by setting "report = FALSE" when executing RunFIREVAT function.

FIREVAT script which can be executed as CLI is located at "scripts/firevat_run.R" in the repository.
This version of script does not contain all of options in RunFIREVAT function. We will update soon.

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