Input/output utilities

Variant Call Format (VCF)

allel.read_vcf

allel.vcf_to_npz

allel.vcf_to_hdf5

allel.vcf_to_zarr

allel.vcf_to_dataframe

allel.vcf_to_csv

allel.vcf_to_recarray

allel.iter_vcf_chunks

allel.read_vcf_headers

allel.ANNTransformer

allel.write_vcf

GFF3

allel.gff3_to_dataframe

allel.gff3_to_recarray

allel.iter_gff3

Fasta

allel.write_fasta