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setup.py
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setup.py
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"""The setup script."""
from setuptools import setup, find_packages
with open("README.rst") as readme_file:
readme = readme_file.read()
with open("HISTORY.rst") as history_file:
history = history_file.read()
requirements = [
"biom-format",
"click",
"decorator",
"ete3",
"future",
"h5py",
"jinja2",
"jinja2schema",
"loguru",
"markupsafe",
"networkx",
"numpy",
"pandas",
"patsy",
"python-dateutil",
"pytz",
"schematics",
"scipy",
"simplejson",
"six",
"statsmodels",
"toml",
]
setup_requirements = ["numpy", "pytest-runner"]
test_requirements = ["pytest", "pytest-cov"]
setup(
author="Dileep Kishore",
author_email="dkishore@bu.edu",
classifiers=[
"Development Status :: Beta",
"Intended Audience :: Scientists, Developers",
"License :: OSI Approved :: MIT License",
"Natural Language :: English",
"Programming Language :: Python :: 3.6",
],
description="The pipeline that powers the Microbial Interaction Network Database",
entry_points={"console_scripts": ["mindpipe=mindpipe.cli:main"]},
install_requires=requirements,
license="MIT license",
long_description=readme + "\n\n" + history,
include_package_data=True,
keywords="mindpipe",
name="mindpipe",
packages=find_packages(include=["mindpipe"]),
setup_requires=setup_requirements,
test_suite="tests",
tests_require=test_requirements,
url="https://github.com/dileep-kishore/mindpipe",
version="0.5.0",
zip_safe=False,
)