topic 3. How to evaluate output?

Specificity, sensitivity, recall, F-score

Receiver operating characteristic curve, AUC

Statistical significance : p -value, False Discovery Rate (FDR)

Supporting Materials
1. PSDR: Chapter 5
2. ROCR package - Visualizing classifier performance in R
3. Benjamini,Y. and Hochberg,Y. (1995) Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing. J Royal Statistical Soc Ser B Methodol, 57, 289–300.

:download:`topic03_measurement.pptx <../ppt/topic03_measurement.pptx>`

:download:`code03.measure.zip <../code/code03.measure.zip>`

:download:`note03_Rsquare-correlation.pdf <../note/note03_Rsquare-correlation.pdf>`