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mutated_rhinovirus_c.yaml
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mutated_rhinovirus_c.yaml
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# A readable name for the benchmark
description: List of genomes with different mutation amount to a Rhinovirus C
# Number of reads per organism
reads_per_organism: 10000
# The sequencer model to emulate (determines the error model used by iss)
# Possible values: novaseq, miseq, hiseq"
models:
- hiseq
abundance: uniform
genomes:
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000100
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_100.1
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000095
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_095.1
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000090
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_090.1
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000085
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_085.1
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000074
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_074.1
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000071
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_071.1
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000065
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_065.1
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000063
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_063.1
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000058
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_058.1
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000053
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_053.1
- category: viruses
organism: rhinovirus_c
lineage:
- level: subspecies
tax_id: 1000000048
- level: species
tax_id: 463676
- level: genus
tax_id: 12059
- level: family
tax_id: 12058
versioned_accession_ids:
- DERISI_HRC_048.1