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Issues: bcbio/bcbio-nextgen

bcbio priorities
#3242 opened May 27, 2020 by naumenko-sa
Open 2
Welcome bcbio 1.2.9
#3592 opened Dec 16, 2021 by naumenko-sa
Open 1
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Issues list

add recommonmark module to readthedocs conf
#3738 by naumenko-sa was merged Dec 23, 2023 Loading…
return submodules to readthedocs config
#3737 by naumenko-sa was merged Dec 23, 2023 Loading…
add os and python to readthedocs yml
#3736 by naumenko-sa was merged Dec 23, 2023 Loading…
exclude submodules in readthedocs build
#3735 by naumenko-sa was merged Dec 23, 2023 Loading…
Save meetas work
#3734 by naumenko-sa was merged Dec 23, 2023 Loading…
deprecate SC user story
#3733 by naumenko-sa was merged Dec 23, 2023 Loading…
updating atac user story documentation
#3732 by mistrm82 was merged Dec 18, 2023 Loading…
ATAC-seq pipeline: what exampley is ready.bam?
#3731 by naumenko-sa was closed Dec 11, 2023
1
Anaconda channels
#3726 by gis-nlsim was closed Dec 11, 2023
1
miRBase old versions are no longer available
#3725 by rchekaluk was closed Dec 11, 2023
1
Files are no longer available on miRBase ftp site
#3724 by rchekaluk was closed Dec 11, 2023
1
miRBase download files are not compressed
#3723 by rchekaluk was closed Dec 11, 2023
1
miRBase genomes URLs have changed
#3722 by rchekaluk was closed Dec 11, 2023
1
miRBase certificate error
#3721 by rchekaluk was closed Dec 11, 2023
1
bcbio run not running samples in parallel
#3719 by toddcreasy was closed Oct 31, 2023
2
Does bcbio support smooth restart when a job is stopped?
#3717 by lovebaboon1989 was closed Oct 26, 2023
2
Error during alignment using STAR
#3716 by tdelisper was closed Dec 11, 2023
2
Failed in generating genome files
#3714 by gis-nlsim was closed Oct 26, 2023
1
1
Installing bcbio in macos in VM fails
#3712 by GACGAMA was closed Oct 26, 2023
1
IBM Power9 (ppc64le) support
#3708 by um-pdavila was closed Oct 26, 2023
1
Question on parrallelization with callable regions
#3704 by nvnieuwk was closed Mar 27, 2023
2
Update BDGP6-resources.yaml
#3703 by naumenko-sa was merged Mar 20, 2023 Loading…
Question: callable regions generation
#3701 by matthdsm was closed Mar 20, 2023
2
subset of chromosome regions bed file
#3697 by TSL-RamKrishna was closed Mar 1, 2023
1
Unable to install on M1 mac
#3696 by alasfar-lina was closed Feb 20, 2023
1
ProTip! Updated in the last three days: updated:>2024-05-02.