/
environment.yml
83 lines (83 loc) · 1.93 KB
/
environment.yml
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name: GIANT-env
channels:
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=5.1=1_gnu
- ca-certificates=2022.07.19=h06a4308_0
- certifi=2022.6.15=py39h06a4308_0
- ld_impl_linux-64=2.38=h1181459_1
- libffi=3.3=he6710b0_2
- libgcc-ng=11.2.0=h1234567_1
- libgomp=11.2.0=h1234567_1
- libstdcxx-ng=11.2.0=h1234567_1
- ncurses=6.3=h5eee18b_3
- openssl=1.1.1q=h7f8727e_0
- pip=22.1.2=py39h06a4308_0
- python=3.9.7=h12debd9_1
- readline=8.1.2=h7f8727e_1
- setuptools=63.4.1=py39h06a4308_0
- sqlite=3.39.2=h5082296_0
- tk=8.6.12=h1ccaba5_0
- tzdata=2022a=hda174b7_0
- wheel=0.37.1=pyhd3eb1b0_0
- xz=5.2.5=h7f8727e_1
- zlib=1.2.12=h7f8727e_2
- pip:
- anndata==0.7.5
- appdirs==1.4.4
- charset-normalizer==2.1.1
- cycler==0.11.0
- cython==0.29.30
- datacache==1.1.5
- docopt==0.6.2
- fonttools==4.36.0
- goatools==1.1.12
- gtfparse==1.2.1
- h5py==3.7.0
- idna==3.3
- igraph==0.9.11
- joblib==1.1.0
- kiwisolver==1.4.4
- leidenalg==0.8.10
- llvmlite==0.39.0
- matplotlib==3.5.3
- memoized-property==1.0.3
- mock==4.0.3
- natsort==8.1.0
- networkx==2.6.3
- numba==0.56.0
- numexpr==2.8.3
- numpy==1.22.4
- packaging==21.3
- pandas==1.4.3
- patsy==0.5.2
- pillow==9.2.0
- progressbar33==2.4
- pydot==1.4.2
- pyensembl==1.9.4
- pynndescent==0.5.7
- pyparsing==3.0.9
- python-dateutil==2.8.2
- pytz==2022.2.1
- requests==2.28.1
- scanpy==1.8.2
- scikit-learn==1.0.1
- scipy==1.9.0
- seaborn==0.11.2
- serializable==0.2.1
- simplejson==3.17.6
- sinfo==0.3.4
- six==1.16.0
- statsmodels==0.13.2
- stdlib-list==0.8.0
- tables==3.7.0
- texttable==1.6.4
- threadpoolctl==3.1.0
- tinytimer==0.0.0
- tqdm==4.64.0
- typechecks==0.1.0
- umap-learn==0.5.3
- urllib3==1.26.12
- xlrd==1.2.0
- xlsxwriter==3.0.3