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cant install correlation extension #38

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Chao86 opened this issue Feb 17, 2020 · 1 comment
Closed

cant install correlation extension #38

Chao86 opened this issue Feb 17, 2020 · 1 comment

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@Chao86
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Chao86 commented Feb 17, 2020

hi, when install correlation extension, an error occured`Collecting spatial-correlation-sampler==0.2.0
Downloading https://files.pythonhosted.org/packages/0e/81/37a407309ba447a7a710d74aa06bfcfed29f160862d824d76e7cdbae57c7/spatial_correlation_sampler-0.2.0.tar.gz
Requirement already satisfied: torch>=1.1 in /data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages (from spatial-correlation-sampler==0.2.0) (1.1.0)
Requirement already satisfied: numpy in /data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages (from spatial-correlation-sampler==0.2.0) (1.17.3)
Building wheels for collected packages: spatial-correlation-sampler
Building wheel for spatial-correlation-sampler (setup.py) ... error
ERROR: Command errored out with exit status 1:
command: /data/ch/anaconda3/envs/THTF/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-otlptma3/spatial-correlation-sampler/setup.py'"'"'; file='"'"'/tmp/pip-install-otlptma3/spatial-correlation-sampler/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-m0g5tnqy --python-tag cp36
cwd: /tmp/pip-install-otlptma3/spatial-correlation-sampler/
Complete output (52 lines):
running bdist_wheel
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.6
creating build/lib.linux-x86_64-3.6/spatial_correlation_sampler
copying Correlation_Module/spatial_correlation_sampler/spatial_correlation_sampler.py -> build/lib.linux-x86_64-3.6/spatial_correlation_sampler
copying Correlation_Module/spatial_correlation_sampler/init.py -> build/lib.linux-x86_64-3.6/spatial_correlation_sampler
running build_ext
Traceback (most recent call last):
File "", line 1, in
File "/tmp/pip-install-otlptma3/spatial-correlation-sampler/setup.py", line 57, in
launch_setup()
File "/tmp/pip-install-otlptma3/spatial-correlation-sampler/setup.py", line 52, in launch_setup
"Topic :: Scientific/Engineering :: Artificial Intelligence"
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/setuptools/init.py", line 145, in setup
return distutils.core.setup(**attrs)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/core.py", line 148, in setup
dist.run_commands()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/wheel/bdist_wheel.py", line 192, in run
self.run_command('build')
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/setuptools/command/build_ext.py", line 84, in run
_build_ext.run(self)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/command/build_ext.py", line 339, in run
self.build_extensions()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/torch/utils/cpp_extension.py", line 232, in build_extensions
self._check_abi()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/torch/utils/cpp_extension.py", line 370, in _check_abi
check_compiler_abi_compatibility(compiler)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/torch/utils/cpp_extension.py", line 162, in check_compiler_abi_compatibility
if not check_compiler_ok_for_platform(compiler):
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/torch/utils/cpp_extension.py", line 138, in check_compiler_ok_for_platform
which = subprocess.check_output(['which', compiler], stderr=subprocess.STDOUT)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/subprocess.py", line 356, in check_output
**kwargs).stdout
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/subprocess.py", line 438, in run
output=stdout, stderr=stderr)
subprocess.CalledProcessError: Command '['which', '/path/to/gcc-5.4.0//bin/g++']' returned non-zero exit status 1.

ERROR: Failed building wheel for spatial-correlation-sampler
Running setup.py clean for spatial-correlation-sampler
Failed to build spatial-correlation-sampler
Installing collected packages: spatial-correlation-sampler
Running setup.py install for spatial-correlation-sampler ... error
ERROR: Command errored out with exit status 1:
command: /data/ch/anaconda3/envs/THTF/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-otlptma3/spatial-correlation-sampler/setup.py'"'"'; file='"'"'/tmp/pip-install-otlptma3/spatial-correlation-sampler/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-fv2lxtb3/install-record.txt --single-version-externally-managed --compile
cwd: /tmp/pip-install-otlptma3/spatial-correlation-sampler/
Complete output (54 lines):
running install
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.6
creating build/lib.linux-x86_64-3.6/spatial_correlation_sampler
copying Correlation_Module/spatial_correlation_sampler/spatial_correlation_sampler.py -> build/lib.linux-x86_64-3.6/spatial_correlation_sampler
copying Correlation_Module/spatial_correlation_sampler/init.py -> build/lib.linux-x86_64-3.6/spatial_correlation_sampler
running build_ext
Traceback (most recent call last):
File "", line 1, in
File "/tmp/pip-install-otlptma3/spatial-correlation-sampler/setup.py", line 57, in
launch_setup()
File "/tmp/pip-install-otlptma3/spatial-correlation-sampler/setup.py", line 52, in launch_setup
"Topic :: Scientific/Engineering :: Artificial Intelligence"
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/setuptools/init.py", line 145, in setup
return distutils.core.setup(**attrs)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/core.py", line 148, in setup
dist.run_commands()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/setuptools/command/install.py", line 61, in run
return orig.install.run(self)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/command/install.py", line 545, in run
self.run_command('build')
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/setuptools/command/build_ext.py", line 84, in run
_build_ext.run(self)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/distutils/command/build_ext.py", line 339, in run
self.build_extensions()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/torch/utils/cpp_extension.py", line 232, in build_extensions
self._check_abi()
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/torch/utils/cpp_extension.py", line 370, in _check_abi
check_compiler_abi_compatibility(compiler)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/torch/utils/cpp_extension.py", line 162, in check_compiler_abi_compatibility
if not check_compiler_ok_for_platform(compiler):
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/site-packages/torch/utils/cpp_extension.py", line 138, in check_compiler_ok_for_platform
which = subprocess.check_output(['which', compiler], stderr=subprocess.STDOUT)
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/subprocess.py", line 356, in check_output
**kwargs).stdout
File "/data/ch/anaconda3/envs/THTF/lib/python3.6/subprocess.py", line 438, in run
output=stdout, stderr=stderr)
subprocess.CalledProcessError: Command '['which', '/path/to/gcc-5.4.0//bin/g++']' returned non-zero exit status 1.
----------------------------------------
ERROR: Command errored out with exit status 1: /data/ch/anaconda3/envs/THTF/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-otlptma3/spatial-correlation-sampler/setup.py'"'"'; file='"'"'/tmp/pip-install-otlptma3/spatial-correlation-sampler/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-fv2lxtb3/install-record.txt --single-version-externally-managed --compile Check the logs for full command output.
`
my enviroment is python->3.6
cuda->9.0
gcc->5.0
torch->1.0
i don't know how to handle please help me, Thank you

@ClementPinard
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Owner

ClementPinard commented Feb 18, 2020

Seems like you have a problem with finding the right g++
Somehow, it thinks that the path to your compiler is /path/to/gcc-5.4.0//bin/g++ have you been playing with environment variables ? what returns the command echo $CXX for you ?
Also can you try to install it from this repo directly instead ?
clone the repo and launch python setup.py install

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