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Roary hack #38

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cmkobel opened this issue Oct 15, 2022 · 2 comments
Closed

Roary hack #38

cmkobel opened this issue Oct 15, 2022 · 2 comments

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@cmkobel
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cmkobel commented Oct 15, 2022 •
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https://github.com/cmkobel/assemblycomparator2/blob/62d1518c59a421532cac5c8e6b812ff987970754/conda_envs/roary.yaml#L3

.. only works if you do:

export PERL5LIB=/home/cmkobel/assemblycomparator2/conda_base/b51707c89e77d1771344e5a65ab516a5_/lib/perl5/site_perl/5.22.0

But that is never gonna be a good solution.
cmkobel added a commit that referenced this issue Oct 15, 2022
@cmkobel
Applying hack #38
6b32230 
#38
@cmkobel
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cmkobel commented Oct 15, 2022

sanger-pathogens/Roary#441

@cmkobel
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cmkobel commented Oct 15, 2022

Partially solved by using $CONDA_PREFIX

@cmkobel cmkobel closed this as not planned Won't fix, can't repro, duplicate, stale Oct 15, 2022
@cmkobel cmkobel changed the title This hack Roary hack Nov 9, 2023
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