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If the pipeline is to work with conda for local setups anyway, I might as well ditch singularity, and focus all the debugging effort on the conda envs instead.
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The reason why I liked having both was that I wanted the quick devel-cycle locally (especially for the report), and didn't care that a few things only worked on the cluster with singularity. I have stopped supporting singularity for new rules, and am currently considering removing singularity completely.
If the pipeline is to work with conda for local setups anyway, I might as well ditch singularity, and focus all the debugging effort on the conda envs instead.
The text was updated successfully, but these errors were encountered: