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This is a duplicate of the another discussion #1057 so I'm locking this. |
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Hi!
I have performed a Reverse complement DotPlot of a nucleotide sequence (180bp) of a proline-rich region containing tandem repeats.
(window=20, threshold=10). Can you suggest whether these parameters will work?
The blue lines indicate that this region has a cluster of repeats and the red lines indicate the matching residues on the reverse complement strand. Would you like to add more to the interpretations?
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