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A user sent this trace, for example:
cuffnorm -p 15 -o $cn_out/$gtf_nm --library-norm-method classic-fpkm --use-sample-sheet $gtf_file .cn_${gtf_nm}.list 2> $cn_out/$gtf_nm/my.log
*** glibc detected *** cuffnorm: free(): invalid next size (fast): 0x0000000000dab200 *** ======= Backtrace: ========= /lib64/libc.so.6[0x35f7a76166] /lib64/libc.so.6[0x35f7a78ca3] cuffnorm[0x4d79e1] cuffnorm[0x417a3e] cuffnorm[0x41abeb] /lib64/libc.so.6(__libc_start_main+0xfd)[0x35f7a1ed1d] cuffnorm[0x40fe19] ======= Memory map: ======== 00400000-005c3000 r-xp 00000000 4f9:2c566 144129331671661695 /lustre/tools_centos6.3/build/cufflinks-2.2.1/install/bin/cuffnorm 007c3000-007c5000 rw-p 001c3000 4f9:2c566 144129331671661695 /lustre/tools_centos6.3/build/cufflinks-2.2.1/install/bin/cuffnorm 007c5000-007d2000 rw-p 00000000 00:00 0 00d5c000-00e22000 rw-p 00000000 00:00 0 [heap] 35f7600000-35f7620000 r-xp 00000000 fd:00 1183199 /lib64/ld-2.12.so 35f781f000-35f7820000 r--p 0001f000 fd:00 1183199 /lib64/ld-2.12.so 35f7820000-35f7821000 rw-p 00020000 fd:00 1183199 /lib64/ld-2.12.so
The text was updated successfully, but these errors were encountered:
I have not been able to reproduce this with the current master.
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A user sent this trace, for example:
cuffnorm -p 15 -o $cn_out/$gtf_nm --library-norm-method classic-fpkm --use-sample-sheet$gtf_file .cn_$ {gtf_nm}.list 2> $cn_out/$gtf_nm/my.log
*** glibc detected *** cuffnorm: free(): invalid next size (fast): 0x0000000000dab200 ***
======= Backtrace: =========
/lib64/libc.so.6[0x35f7a76166]
/lib64/libc.so.6[0x35f7a78ca3]
cuffnorm[0x4d79e1]
cuffnorm[0x417a3e]
cuffnorm[0x41abeb]
/lib64/libc.so.6(__libc_start_main+0xfd)[0x35f7a1ed1d]
cuffnorm[0x40fe19]
======= Memory map: ========
00400000-005c3000 r-xp 00000000 4f9:2c566 144129331671661695
/lustre/tools_centos6.3/build/cufflinks-2.2.1/install/bin/cuffnorm
007c3000-007c5000 rw-p 001c3000 4f9:2c566 144129331671661695
/lustre/tools_centos6.3/build/cufflinks-2.2.1/install/bin/cuffnorm
007c5000-007d2000 rw-p 00000000 00:00 0
00d5c000-00e22000 rw-p 00000000 00:00 0 [heap]
35f7600000-35f7620000 r-xp 00000000 fd:00 1183199 /lib64/ld-2.12.so
35f781f000-35f7820000 r--p 0001f000 fd:00 1183199 /lib64/ld-2.12.so
35f7820000-35f7821000 rw-p 00020000 fd:00 1183199 /lib64/ld-2.12.so
The text was updated successfully, but these errors were encountered: