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WDL Expressions in workflow input definitions #240

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mr-c opened this issue Apr 15, 2024 · 0 comments
Open

WDL Expressions in workflow input definitions #240

mr-c opened this issue Apr 15, 2024 · 0 comments

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@mr-c
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mr-c commented Apr 15, 2024

Example:

String Outfile = basename(queryfa)+'.blast_result.txt'

  1. Synthesize a new step to compute a static value for each dynamic input, something like _calc_{inputname}: _calc_Outfile with a single output named result
  2. Rewrite all references to the original dynamic input to this static value: basically connecting _calc_OutFile/result instead of Outfile in all of the WorkflowStep.in sections
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