/
conflict-wf.cwl
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/
conflict-wf.cwl
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cwlVersion: v1.0
$graph:
- id: echo
class: CommandLineTool
inputs:
text:
type: string
inputBinding: {}
outputs:
fileout:
type: File
outputBinding:
glob: out.txt
baseCommand: echo
stdout: out.txt
- id: cat
class: CommandLineTool
inputs:
file1:
type: File
inputBinding:
position: 1
file2:
type: File
inputBinding:
position: 2
outputs:
fileout:
type: File
outputBinding:
glob: out.txt
baseCommand: cat
stdout: out.txt
- class: Workflow
id: collision
inputs:
input_1: string
input_2: string
outputs:
fileout:
type: File
outputSource: cat_step/fileout
steps:
echo_1:
run: "#echo"
in:
text: input_1
out: [fileout]
echo_2:
run: "#echo"
in:
text: input_2
out: [fileout]
cat_step:
run: "#cat"
in:
file1:
source: echo_1/fileout
file2:
source: echo_2/fileout
out: [fileout]