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COSIpy Installation - missing files (in setuptools include_package_data) #134
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Thanks for catching this, @avalluvan. The missing housekeeping files are actually not currently needed, and so I've removed this from the code. I just submitted a PR to resolve this issue. |
Thanks for reporting this, @avalluvan. Indeed @ckarwin's fix will work for now, but the underlying issue is that I forgot that setuptools does not include all the data by default, only the code source files. I need to use include_package_data. I'll merge @ckarwin's PR, but I'll keep this issue open to remind me to fix this for the public release. |
I am having the same issue in MacOS, M1 Max. How exactly do we implement @ckarwin 's fix to get past this error in the testing? (Or do we wait for the public release?) |
I think I figured it out, I made @ckarwin 's modifications in my local DataIO.py file. :-) |
Yes, thanks @StevenBoggs. That's the fix for now until we make an updated release. |
@ckarwin I made a new alpha release (v0.0.2a3) to include your changes and fix this particular problem with the DataIO. I still need to see which other files to list in include_package_data, but this should work for now. |
Great, thank you. Are you going to keep this issue open for now? |
Yeah, I want to make a list of all the files that are really needed so I can include them in the release. Maybe we can discuss this next week. |
Yes, sounds good. |
I'm closing this because we are now not using the test_data for the examples at all, only data from wasabi. |
Hi team,
![Screenshot 2024-02-13 215645](https://private-user-images.githubusercontent.com/62253557/304924443-5404d487-97a6-4aaa-b2b5-db028792aadd.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.kUcsG1okQTAQOL4Fo2e4cZeRLKysL6FzcQ6XBp-cA48)
![Screenshot 2024-02-13 215745](https://private-user-images.githubusercontent.com/62253557/304924444-2c45f9c4-b37b-4a07-9f0d-02de63f9e845.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3MjAzNTEyMjgsIm5iZiI6MTcyMDM1MDkyOCwicGF0aCI6Ii82MjI1MzU1Ny8zMDQ5MjQ0NDQtMmM0NWY5YzQtYjM3Yi00YTA3LTlmMGQtMDJkZTYzZjllODQ1LnBuZz9YLUFtei1BbGdvcml0aG09QVdTNC1ITUFDLVNIQTI1NiZYLUFtei1DcmVkZW50aWFsPUFLSUFWQ09EWUxTQTUzUFFLNFpBJTJGMjAyNDA3MDclMkZ1cy1lYXN0LTElMkZzMyUyRmF3czRfcmVxdWVzdCZYLUFtei1EYXRlPTIwMjQwNzA3VDExMTUyOFomWC1BbXotRXhwaXJlcz0zMDAmWC1BbXotU2lnbmF0dXJlPWQyNWI5Nzk3NjViMzhhY2I2ZGFmMzEwZDI2M2U1MGE4NTA3ZGNhMjQ4ZjIxOWQ5NjUwM2U3MjlmNzQ1ZTBhMWEmWC1BbXotU2lnbmVkSGVhZGVycz1ob3N0JmFjdG9yX2lkPTAma2V5X2lkPTAmcmVwb19pZD0wIn0.Fz6vvWZlUr2-58tzh-gvS658MmMi5PrIp2ozAa5UdMQ)
![Screenshot 2024-02-13 215813](https://private-user-images.githubusercontent.com/62253557/304924448-4fddbe6f-5e0d-49b0-a772-06b3a773c3b3.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.OhcFNGSh4s-lj4rYydr_V--BwhZ9sBMeZrhzZIzj9YA)
I have installed COSIpy within a virtual python environment (v3.10) over WSL (Ubuntu 22.04). When I tried to run the Data I/O notebook out-of-the-box, the following input "housekeeping" files were missing:
Performing a simple
wget
from the source fixed the issue.The text was updated successfully, but these errors were encountered: