Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Sudden Emergence of FR.1+9-nuc,3-aa including orf9b:G31R in China(56 seqs,5 countries) #2039

Closed
aviczhl2 opened this issue Jun 5, 2023 · 4 comments
Closed

Sudden Emergence of FR.1+9-nuc,3-aa including orf9b:G31R in China(56 seqs,5 countries) #2039

aviczhl2 opened this issue Jun 5, 2023 · 4 comments
Labels
designated
Milestone
FR.1.3

Comments

@aviczhl2
Copy link
Contributor

aviczhl2 commented Jun 5, 2023

Transferred from sars-cov-2-variants/lineage-proposals#126

FR.1+C25572T+C337T+C882T(orf1a:A206V)+C14097T,C15017T(orf1b:A517V)+T28019C,C14599T,C25603T+G28374A(orf9b:G31R, N:G34E)

GISAID query: del28367_28375,T28019C,C14599T,C25603T

Note that the default for omicron is del28364_28372, and GISAID categorizes del28364_28372+G28374A to del28367_28375.

No. of seqs: 48( China 46(9 provinces , 2 from Singapore, 1 from Canada), Singapore 1(from Hong Kong) South Korea 1(from Hong Kong))

First seq: EPI_ISL_17645692, Sichuan, 4-1
Latest: EPI_ISL_17735959, Sichuan, 5-22

usher

image
@aviczhl2 aviczhl2 changed the title Sudden Emergence of FR.1+9-nuc,3-aa in China(48 seqs,4 countries) Sudden Emergence of FR.1+9-nuc,3-aa including orf9b:G31R in China(48 seqs,4 countries) Jun 5, 2023
@aviczhl2 aviczhl2 changed the title Sudden Emergence of FR.1+9-nuc,3-aa including orf9b:G31R in China(48 seqs,4 countries) Sudden Emergence of FR.1+9-nuc,3-aa including orf9b:G31R in China(51 seqs,4 countries) Jun 8, 2023
@aviczhl2
Copy link
Contributor Author

aviczhl2 commented Jun 9, 2023

56 and detected in Luxemberg.

@aviczhl2 aviczhl2 changed the title Sudden Emergence of FR.1+9-nuc,3-aa including orf9b:G31R in China(51 seqs,4 countries) Sudden Emergence of FR.1+9-nuc,3-aa including orf9b:G31R in China(56 seqs,5 countries) Jun 9, 2023
@aviczhl2
Copy link
Contributor Author

aviczhl2 commented Jul 9, 2023

This is FR.1.3 and shall add a label on it. @corneliusroemer

@corneliusroemer corneliusroemer added this to the FL.1.3 milestone Jul 11, 2023
@aviczhl2
Copy link
Contributor Author

The label shall be FR.1.3

@Over-There-Is
Copy link
Contributor

@corneliusroemer

@Memorablea Memorablea mentioned this issue Jul 18, 2023
Closed
@corneliusroemer corneliusroemer modified the milestones: FL.1.3, FR.1.3 Jul 18, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
designated
Projects
None yet
Milestone
FR.1.3
Development

No branches or pull requests
3 participants
@aviczhl2 @corneliusroemer @Over-There-Is