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MD5
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MD5
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601162e3337957db19a32260732ea767 *ChangeLog
ae163759b1dc2fa2f28cc07a70675356 *DESCRIPTION
8d070a3fc6a69b0038d89e7cb322283f *NAMESPACE
cbdf308393d62f46f0d8bc2f5d4470b6 *R/interface.R
c0d0d9160caaf41e22f0265b788c7e00 *R/mutationRates.R
9a32af7fc041e4b0647256cd3b1c0d78 *R/plot.R
7c5f7e13c48e36773a0bf21ccf150540 *R/reproRate.R
dc26678070da5a3942b779aa0670d4f3 *R/selectChains.R
8d1ec99dfe42cad086080ce894bedc53 *R/simOutbreak.R
990220c60064b08f33b3b274f3298e76 *R/tTree.R
92d8aa7bf09017257369dcfdf00a82cb *R/zzz.R
72b5047fee7ef404647d8c939b9ec91b *configure
a6d485ade20b5042ab8459e99f45c895 *configure.ac
be94f9222da3b7b700fd9465a911de54 *data/fakeOutbreak.RData
2cb344c2133da976ccf7ab341e81353b *inst/CITATION
0d5cd8ac8f915095773450ce55e2f669 *man/Rstat.Rd
c774351eefcfdd1193bc820ceb2efd8c *man/fakeOutbreak.Rd
673bb1c09567800e344e804d57e63b67 *man/getMu.Rd
267f2b08e08a12fe2d620bd8710fdcd1 *man/mainplots.Rd
3f3598d6c879885a72a726dfe55931be *man/outbreaker.Rd
9371cd191f2415c26d7200ca4e54c38c *man/selectChains.Rd
6d8bdeb6a222dafbff639c96b0228e44 *man/simOutbreak.Rd
d88c062ac774d6aa5583ea359f503b61 *man/tTree.Rd
417be231e3b2ad76fb58f63e6282a843 *src/Makevars.in
3f7c071f1a65529da9c401162d49a54a *src/Makevars.win
99a7bee1d86047db4fbb293bbce66535 *src/common.h
7ff225babba90626cdbf9edd9fa02540 *src/distances.c
1cc954d68dfe5933d9424a3eac9b5bba *src/distances.h
08010b933f0ccb241d6c5d94a0f67f73 *src/genclasses.c
06a461664c434629cb567fc5d25d8156 *src/genclasses.h
3301c6dc9d874a2f6dee7e6170db2985 *src/init.c
4975d1b53399a67f5f94358a013d26b7 *src/init.h
83a270f777d54a124b3681a42bf7103a *src/likelihood.c
38fcf57840a35802c45118d43ced95bd *src/likelihood.h
02ba8d225eb3b405cd237e879b0abbba *src/matvec.c
b5e29a394d577993c7b301e2235c40ec *src/matvec.h
8325cc315d2881988b72a666ee60d945 *src/mcmc.c
1aef3fd5435b818318bb0fc3af1d1295 *src/mcmc.h
7ea50bca494303845e8ba4e62cd465ff *src/moves.c
d5e38df1932ec27dfa188ca56583868b *src/moves.h
17cf15ebb49399c476af5e40b998862a *src/outbreaker.c
ab6b405475a66ad44d59aa153d341ed3 *src/prior.c
8a56d478207d395beaf8a9c34758fa63 *src/prior.h
1aa3691b3ecdeb22e3661e1872d6f918 *src/structures.c
5be81678a2d88961615cf373e2d13a75 *src/structures.h