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MD5
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MD5
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6f7601de240d16818c58279443234e82 *ChangeLog
0afe399fe818cbf347093bab4ed0587b *DESCRIPTION
b1c3a9ccc2b95d7b57297d94b2386013 *NAMESPACE
5a4911c7c93d8f013f5b4d50f177664f *R/interface.R
c0d0d9160caaf41e22f0265b788c7e00 *R/mutationRates.R
9a32af7fc041e4b0647256cd3b1c0d78 *R/plot.R
7c5f7e13c48e36773a0bf21ccf150540 *R/reproRate.R
dc26678070da5a3942b779aa0670d4f3 *R/selectChains.R
4165628403dee64f801de3540f4b8ffb *R/simOutbreak.R
990220c60064b08f33b3b274f3298e76 *R/tTree.R
92d8aa7bf09017257369dcfdf00a82cb *R/zzz.R
72b5047fee7ef404647d8c939b9ec91b *configure
a6d485ade20b5042ab8459e99f45c895 *configure.ac
6c78ac58c5fe4b01507d3c0e248d9e73 *data/fakeOutbreak.RData
2cb344c2133da976ccf7ab341e81353b *inst/CITATION
0d5cd8ac8f915095773450ce55e2f669 *man/Rstat.Rd
c774351eefcfdd1193bc820ceb2efd8c *man/fakeOutbreak.Rd
673bb1c09567800e344e804d57e63b67 *man/getMu.Rd
267f2b08e08a12fe2d620bd8710fdcd1 *man/mainplots.Rd
62981b79f3ac347f5b2228279b6bdf52 *man/outbreaker.Rd
9371cd191f2415c26d7200ca4e54c38c *man/selectChains.Rd
b294e1d1c2e6f6e4ed85a92ac499fee2 *man/simOutbreak.Rd
d88c062ac774d6aa5583ea359f503b61 *man/tTree.Rd
417be231e3b2ad76fb58f63e6282a843 *src/Makevars.in
3f7c071f1a65529da9c401162d49a54a *src/Makevars.win
99a7bee1d86047db4fbb293bbce66535 *src/common.h
e595ef045cd09302f40a02514995e2e8 *src/distances.c
1cc954d68dfe5933d9424a3eac9b5bba *src/distances.h
08010b933f0ccb241d6c5d94a0f67f73 *src/genclasses.c
06a461664c434629cb567fc5d25d8156 *src/genclasses.h
3ad79f6576fdb8d34fcc351f74a622d6 *src/init.c
0fd6b85a1b8176f5b2af34d53ce6653a *src/init.h
bcf329a6583233e0d11ab400bb68e8c8 *src/likelihood.c
eeb552bc8594c574006c5e6ce2822a45 *src/likelihood.h
64bb8fd6b17f11ccf06c813ed449acbc *src/matvec.c
b5e29a394d577993c7b301e2235c40ec *src/matvec.h
52b0f6abee029516a2d633217c82444a *src/mcmc.c
24b99bbb49670919ed20fa28174b6b8d *src/mcmc.h
d2e08330f7182fdba96fd4bd162466a3 *src/moves.c
e61ce64e7da21b57a04ad3987beab313 *src/moves.h
3ea48b34fbb6c7a649527d6c7840f1c6 *src/outbreaker.c
935f5bfe6339de0e2090a744d14c6224 *src/prior.c
429d8a269ab703fda89931e9c6404dfc *src/prior.h
3c4e5424154f6618efc17ccd2ed42d1a *src/structures.c
0796def1dc6326c59a46e22088d1b179 *src/structures.h