/
urls.py
148 lines (146 loc) · 9.03 KB
/
urls.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
# Copyright (c) 2019, CRS4
#
# Permission is hereby granted, free of charge, to any person obtaining a copy of
# this software and associated documentation files (the "Software"), to deal in
# the Software without restriction, including without limitation the rights to
# use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of
# the Software, and to permit persons to whom the Software is furnished to do so,
# subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in all
# copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS
# FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR
# COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER
# IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
# CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
from django.conf.urls import url
from . import views
urlpatterns = [
# 'django.views.generic.simple',
# INITIALIZE SESSION
url(r'connect/$', views.start_connection, name='ome_seadragon_connect'),
# TEST
url(r'^test/$', views.check_app, name='ome_seadragon_test'),
url(r'test/repository/$', views.check_repository, name='ome_seadragon_test_repository'),
url(r'test/repository/(?P<image_id>[0-9]+)/$', views.check_image_path,
name='ome_seadragon_test_image_path'),
# EXAMPLES
url(r'^examples/viewer/(?P<image_id>[\w\-.]+)/$', views.get_example_viewer,
name='ome_seadragon_test_viewer'),
url(r'^examples/viewer_json/(?P<image_id>[\w\-.]+)/$', views.get_example_viewer_json,
name='ome_seadragon_test_viewer_json'),
url(r'^examples/sequence_viewer/(?P<dataset_id>[0-9]+)/$', views.get_example_sequence_viewer,
name='ome_seadragon_test_sequence_viewer'),
url(r'^examples/double_viewer/(?P<image_a_id>[\w\-.]+)_(?P<image_b_id>[\w\-.]+)/$',
views.get_example_double_viewer, name='ome_seadragon_test_double_viewer'),
url(r'^examples/annotations/(?P<image_id>[\w\-.]+)/$', views.get_example_annotations,
name='ome_seadragon_test_annotations'),
url(r'^examples/ome_rois/(?P<image_id>[0-9]+)/$', views.get_example_ome_rois,
name='ome_seadragon_test_ome_rois'),
url(r'^examples/custom_handlers/markers/(?P<image_id>[\w\-.]+)/$',
views.get_example_interactive_markers,
name='ome_seadragon_test_interactive_markers'),
url(r'^examples/custom_handlers/polygons/(?P<image_id>[\w\-.]+)/$',
views.get_example_interactive_polygons,
name='ome_seadragon_test_interactive_polygons'),
url(r'^examples/custom_handlers/rulers/(?P<image_id>[\w\-.]+)/$',
views.get_example_interactive_rulers,
name='ome_seadragon_test_interactive_rulers'),
url(r'^examples/custom_handlers/freehand/(?P<image_id>[\w\-.]+)/$',
views.get_example_interactive_freehand),
url(r'^examples/array_viewer/(?P<dataset_label>[\w\-.]+)/$', views.get_example_array_viewer,
name='ome_seadragon_test_array_viewer'),
url(r'^examples/overlay_viewer/(?P<image_id>[\w\-.]+)/(?P<dataset_label>[\w\-.]+)/$',
views.get_example_overlay_viewer, name='ome_seadragon_test_overlay_viewer'),
url(r'^examples/shapes_from_array/(?P<image_id>[\w\-.]+)/(?P<dataset_id>[0-9]+)/$',
views.get_example_dataset_shapes_viewer, name='ome_seadragon_test_shapes_from_array'),
# OMERO PROJECTS, DATASETS AND IMAGES
url(r'^get/projects/$', views.get_projects, name='ome_seadragon_get_projects'),
url(r'^get/project/(?P<project_id>[0-9]+)/$', views.get_project,
name='ome_seadragon_get_project'),
url(r'^get/dataset/(?P<dataset_id>[0-9]+)/$', views.get_dataset,
name='ome_seadragon_get_dataset'),
url(r'^get/image/(?P<image_id>[0-9]+)/$', views.get_image,
name='ome_seadragon_get_image'),
url(r'^get/images/index/$', views.get_images_quick_list,
name='ome_seadragon_get_images_index'),
# OMERO TAGS
url(r'^get/annotations/$', views.get_annotations,
name='ome_seadragon_get_annotations'),
url(r'^get/tagset/(?P<tagset_id>[0-9]+)/$', views.get_tagset,
name='ome_seadragon_get_tagset'),
url(r'^get/tag/(?P<tag_id>[0-9]+)/$', views.get_tag,
name='ome_seadragon_get_tag'),
url(r'^find/annotations/$', views.find_annotations,
name='ome_seadragon_find_tags'),
# DEEPZOOM
url(r'^deepzoom/get/(?P<image_id>[0-9]+).dzi$', views.get_image_dzi,
name='ome_seadragon_image_dzi_metadata'),
url(r'^deepzoom/get/(?P<image_id>[0-9]+).json$', views.get_image_json,
name='ome_seadragon_image_json_metadata'),
url(r'^deepzoom/get/(?P<image_id>[0-9]+)_metadata.json$', views.get_image_metadata,
name='ome_seadragon_image_json_metadata_full'),
url(r'^deepzoom/get/thumbnail/(?P<image_id>[0-9]+).dzi$', views.get_image_thumbnail,
name='ome_seadragon_image_thumbnail'),
url(r'^deepzoom/get/(?P<image_id>[0-9]+)_files/(?P<level>[0-9]+)/'
r'(?P<column>[0-9]+)_(?P<row>[0-9]+).(?P<tile_format>[\w]+)$',
views.get_tile, name='ome_seadragon_get_tile'),
url(r'^deepzoom/image_mpp/(?P<image_id>[0-9]+).dzi$', views.get_image_mpp,
name='ome_seadragon_get_image_mpp'),
url(r'^deepzoom/slide_bounds/(?P<image_id>[0-9]+).dzi$', views.get_slide_bounds,
name='ome_seadragon_get_slide_bounds'),
# ORIGINAL FILES HANDLING
url(r'^file/register/$', views.register_original_file, name='ome_seadragon_file_save'),
url(r'^file/info/(?P<file_name>[\w\-.]+)/$', views.get_original_file_infos,
name='ome_seadragon_file_info'),
url(r'^file/delete/(?P<file_name>[\w\-.]+)/$', views.delete_original_file,
name='ome_seadragon_delete_file'),
# 3DHISTECH FILES HANDLING --- DATA MANAGEMENT
url(r'mirax/register_slide/$', views.register_mirax_slide, name='ome_seadragon_register_mirax'),
url(r'^mirax/delete_files/(?P<file_name>[\w\-.]+)/$', views.delete_original_files,
name='ome_seadragon_mrxs_delete_files'),
url(r'mirax/details/(?P<slide_id>[\w\-.]+).json$', views.get_mirax_slide_details,
name='ome_seadragon_mirax_details'),
# 3DHISTECH FILES HANDLING --- DEEPZOOM
url(r'^mirax/deepzoom/get/(?P<image_id>[\w\-.]+).dzi$', views.get_image_dzi,
name='ome_seadragon_image_dzi_metadata_mrxs',
kwargs={'fetch_original_file': True, 'file_mimetype': 'mirax/index'}),
url(r'^mirax/deepzoom/get/(?P<image_id>[\w\-.]+)_metadata.json$', views.get_image_metadata,
name='ome_seadragon_image_json_metadata_full',
kwargs={'fetch_original_file': True, 'file_mimetype': 'mirax/index'}),
url(r'^mirax/deepzoom/get/(?P<image_id>[\w\-.]+).json$', views.get_image_json,
name='ome_seadragon_image_json_metadata_mrxs',
kwargs={'fetch_original_file': True, 'file_mimetype': 'mirax/index'}),
url(r'^mirax/deepzoom/get/thumbnail/(?P<image_id>[\w\-.]+).dzi$', views.get_image_thumbnail,
name='ome_seadragon_image_thumbnail_mrxs',
kwargs={'fetch_original_file': True, 'file_mimetype': 'mirax/index'}),
url(r'^mirax/deepzoom/get/(?P<image_id>[\w\-.]+)_files/(?P<level>[0-9]+)/'
r'(?P<column>[0-9]+)_(?P<row>[0-9]+).(?P<tile_format>[\w]+)$',
views.get_tile, name='ome_seadragon_get_tile_mrxs',
kwargs={'fetch_original_file': True, 'file_mimetype': 'mirax/index'}),
url(r'^mirax/deepzoom/image_mpp/(?P<image_id>[\w\-.]+).dzi$', views.get_image_mpp,
name='ome_seadragon_get_image_mpp_mrxs',
kwargs={'fetch_original_file': True, 'file_mimetype': 'mirax/index'}),
url(r'^mirax/deepzoom/slide_bounds/(?P<image_id>[\w\-.]+).dzi$', views.get_slide_bounds,
name='ome_seadragon_get_slide_bounds',
kwargs={'fetch_original_file': True, 'file_mimetype': 'mirax/index'}),
# ARRAY DATASETS --- FILES HANDLING
url(r'^arrays/list/$', views.list_array_datasets, name='ome_seadragon_list_array_datasets'),
url(r'^arrays/register_dataset/$', views.register_array_dataset, name='ome_seadragon_register_array_dataset'),
# ARRAY DATASETS --- DEEPZOOM
url(r'^arrays/deepzoom/get/(?P<dataset_id>[0-9]+).dzi$', views.get_array_dataset_dzi_by_id,
name='ome_seadragon_array_datasets_dzi_metadata_by_id'),
url(r'^arrays/deepzoom/get/(?P<dataset_label>[\w\-.]+).dzi$', views.get_array_dataset_dzi_by_label,
name='ome_seadragon_array_datasets_dzi_metadata'),
url(r'^arrays/deepzoom/get/(?P<dataset_id>[0-9]+)_files/(?P<level>[0-9]+)/'
r'(?P<column>[0-9]+)_(?P<row>[0-9]+).png$', views.get_array_dataset_tile_by_id,
name='ome_seadragon_array_datasets_get_tile_by_id'),
url(r'^arrays/deepzoom/get/(?P<dataset_label>[\w\-.]+)_files/(?P<level>[0-9]+)/'
r'(?P<column>[0-9]+)_(?P<row>[0-9]+).png$', views.get_array_dataset_tile_by_label,
name='ome_seadragon_array_datasets_get_tile'),
url(r'^arrays/shapes/get/(?P<dataset_id>[0-9]+)/$', views.get_array_dataset_shapes,
name='ome_seadragon_array_datasets_get_shapes')
]