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@CSIM-Toolkits

Computing in Signals and Images in Medicine Laboratory

A research group focused on biomedical image and signal applications.

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  1. ITK ITK Public

    Repository to share codes implemented to run on ITK platform.

    C++ 7 5

  2. Slicer-LesionSimulatorExtension Slicer-LesionSimulatorExtension Public

    3D Slicer extension that provides a toolkit for Multiple Sclerosis lesion simulation in multimodal MRI images, such as T1, T2, T2-FLAIR and DTI scalar maps.

    C++ 7 2

  3. LesionSpotlightExtension LesionSpotlightExtension Public

    3D Slicer extension that provides T2-FLAIR MRI manipulation methods in order to increase contrast and segment hyperintense Multiple Sclerosis lesions

    Python 2 2

  4. MSLesionTrackExtension MSLesionTrackExtension Public

    3D Slicer extension to segment Multiple Sclerosis lesions on DTI and Structural MRI images

    Python

  5. AnomalousFiltersExtension AnomalousFiltersExtension Public

    3D Slicer extension that provides several approaches in order to apply the anomalous spatial filters on medical images.

    C++ 2

  6. SlicerDiffusionComplexityMap SlicerDiffusionComplexityMap Public

    Slice module to offer the Diffusion Complexity Map algorithm

    C++ 1

Repositories

Showing 10 of 23 repositories
  • SlicerDiffusionComplexityMap Public

    Slice module to offer the Diffusion Complexity Map algorithm

    CSIM-Toolkits/SlicerDiffusionComplexityMap’s past year of commit activity
    C++ 0 MIT 1 0 0 Updated May 3, 2024
  • Slicer-LesionSimulatorExtension Public

    3D Slicer extension that provides a toolkit for Multiple Sclerosis lesion simulation in multimodal MRI images, such as T1, T2, T2-FLAIR and DTI scalar maps.

    CSIM-Toolkits/Slicer-LesionSimulatorExtension’s past year of commit activity
    C++ 7 Apache-2.0 2 5 0 Updated Apr 16, 2024
  • LesionSpotlightExtension Public

    3D Slicer extension that provides T2-FLAIR MRI manipulation methods in order to increase contrast and segment hyperintense Multiple Sclerosis lesions

    CSIM-Toolkits/LesionSpotlightExtension’s past year of commit activity
    Python 2 Apache-2.0 2 3 0 Updated Apr 15, 2024
  • ROBEXBrainExtraction Public

    3D Slicer extension to offer a brain extraction algorithm for MRI structural images. This extension has the ROBEX brain extraction implementation.

    CSIM-Toolkits/ROBEXBrainExtraction’s past year of commit activity
    C++ 6 2 1 0 Updated Apr 15, 2024
  • AnomalousFiltersExtension Public

    3D Slicer extension that provides several approaches in order to apply the anomalous spatial filters on medical images.

    CSIM-Toolkits/AnomalousFiltersExtension’s past year of commit activity
    C++ 0 Apache-2.0 2 4 0 Updated Apr 2, 2024
  • ITK Public

    Repository to share codes implemented to run on ITK platform.

    CSIM-Toolkits/ITK’s past year of commit activity
    C++ 7 5 1 0 Updated Nov 24, 2023
  • SlicerBrainVolumeRefinement Public

    Extension for the Brain Volume Refinement methods (BVeR)

    CSIM-Toolkits/SlicerBrainVolumeRefinement’s past year of commit activity
    C++ 0 Apache-2.0 2 1 1 Updated Jun 18, 2022
  • TiCCE Public

    Tissue Characterization and Classification Extension for 3DSlicer

    CSIM-Toolkits/TiCCE’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Sep 9, 2019
  • ITKAutomaticConductanceCalculator Public

    Official repository to Automatic Conductance Image Calculator to ITK Remote Module.

    CSIM-Toolkits/ITKAutomaticConductanceCalculator’s past year of commit activity
    C++ 1 Apache-2.0 1 0 1 Updated Dec 9, 2018
  • ITKAnomalousDiffusionFilters Public

    Official repository to CSIM ITKAnomalousDiffusionFilters to ITK builds and remote repository

    CSIM-Toolkits/ITKAnomalousDiffusionFilters’s past year of commit activity
    C++ 0 Apache-2.0 1 0 1 Updated Dec 9, 2018

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