2411: Add copyright notices to everything.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curoverse.com>

Makefile

@@ -1,3 +1,7 @@
+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: AGPL-3.0
+
 export WORKSPACE?=$(shell pwd)
 help:
 	@echo >&2

README.md

@@ -1,3 +1,7 @@
+[//]: # Copyright (C) The Arvados Authors. All rights reserved.
+[//]: #
+[//]: # SPDX-License-Identifier: CC-BY-SA-3.0
+
 [Arvados](https://arvados.org) is a free software distributed computing platform
 for bioinformatics, data science, and high throughput analysis of massive data
 sets.  Arvados supports a variety of cloud, cluster and HPC environments.

apps/workbench/Gemfile

@@ -1,3 +1,7 @@
+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: AGPL-3.0
+
 source 'https://rubygems.org'
 
 gem 'rails', '~> 4.1'

apps/workbench/README.textile

@@ -1,3 +1,7 @@
+###. Copyright (C) The Arvados Authors. All rights reserved.
+....
+.... SPDX-License-Identifier: AGPL-3.0
+
 h1. Developing Workbench
 
 This document includes information to help developers who would like to contribute to Workbench.  If you just want to install it, please refer to our "Workbench installation guide":http://doc.arvados.org/install/install-workbench-app.html.

apps/workbench/Rakefile

@@ -1,4 +1,8 @@
 #!/usr/bin/env rake
+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: AGPL-3.0
+
 # Add your own tasks in files placed in lib/tasks ending in .rake,
 # for example lib/tasks/capistrano.rake, and they will automatically be available to Rake.
 

apps/workbench/app/assets/javascripts/add_group.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $(document).on('shown.bs.modal', '#add-group-modal', function(event) {
     // Disable the submit button on modal loading
     $submit = $('#add-group-submit');

apps/workbench/app/assets/javascripts/add_repository.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $(document).on('shown.bs.modal', '#add-repository-modal', function(event) {
     $('input[type=text]', event.target).val('');
     $('#add-repository-error', event.target).hide();

apps/workbench/app/assets/javascripts/ajax_error.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $(document).on('ajax:error', function(e, xhr, status, error) {
     var errorMessage = '' + status + ': ' + error;
     // $btn is the element (button/link) that initiated the failed request.

apps/workbench/app/assets/javascripts/angular_shim.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // Compile any new HTML content that was loaded via jQuery.ajax().
 // Currently this only works for tabs, and only because they emit an
 // arv:pane:loaded event after updating the DOM.

apps/workbench/app/assets/javascripts/application.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+//
 // This is a manifest file that'll be compiled into application.js, which will include all the files
 // listed below.
 //

apps/workbench/app/assets/javascripts/arvados_client.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 angular.
     module('Arvados', []).
     service('ArvadosClient', ArvadosClient);

apps/workbench/app/assets/javascripts/bootstrap.js.coffee

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 jQuery ->
   $("a[rel=popover]").popover()
   $(".tooltip").tooltip()

apps/workbench/app/assets/javascripts/collections.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 jQuery(function($){
     $(document).on('click', '.toggle-persist button', function() {
         var toggle_group = $(this).parents('[data-remote-href]').first();

apps/workbench/app/assets/javascripts/dates.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 jQuery(function($){
 $(document).on('ajax:complete arv:pane:loaded ready', function() {
     $('[data-utc-date]').each(function(i, elm) {

apps/workbench/app/assets/javascripts/edit_collection.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // On loading of a collection, enable the "lock" button and
 // disable all file modification controls (upload, rename, delete)
 $(document).

apps/workbench/app/assets/javascripts/edit_collection_tags.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 jQuery(function($){
   $(document).
     on('click', '.collection-tag-save, .collection-tag-cancel', function(event) {

apps/workbench/app/assets/javascripts/editable.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $.fn.editable.defaults.ajaxOptions = {type: 'post', dataType: 'json'};
 $.fn.editable.defaults.send = 'always';
 

apps/workbench/app/assets/javascripts/event_log.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 /*
  * This js establishes a websockets connection with the API Server.
  */

apps/workbench/app/assets/javascripts/filterable.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // filterable.js shows/hides content when the user operates
 // search/select widgets. For "infinite scroll" content, it passes the
 // filters to the server and retrieves new content. For other content,

apps/workbench/app/assets/javascripts/infinite_scroll.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // infinite_scroll.js displays a tab's content using automatic scrolling
 // when the user scrolls to the bottom of the page and there is more data.
 //

apps/workbench/app/assets/javascripts/job_log_graph.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 /* Assumes existence of:
   window.jobGraphData = [];
   window.jobGraphSeries = [];

apps/workbench/app/assets/javascripts/keep_disks.js.coffee

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 cache_age_in_days = (milliseconds_age) ->
   ONE_DAY = 1000 * 60 * 60 * 24
   milliseconds_age / ONE_DAY

apps/workbench/app/assets/javascripts/link_to_remote.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $.rails.href = function(element) {
     if (element.is('a')) {
         // data-remote=true links must put their remote targets in

apps/workbench/app/assets/javascripts/log_viewer.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 function newTaskState() {
     return {"complete_count": 0,
             "failure_count": 0,

apps/workbench/app/assets/javascripts/modal_pager.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // Usage:
 //
 // 1. Add some buttons to your modal, one with class="pager-next" and

apps/workbench/app/assets/javascripts/permission_toggle.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $(document).
     on('click', '[data-toggle-permission] input[type=checkbox]', function() {
         var data = {};

apps/workbench/app/assets/javascripts/pipeline_instances.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 function run_pipeline_button_state() {
     var a = $('a.editable.required.editable-empty,input.form-control.required[value=""]');
     if ((a.length > 0) || ($('.unreadable-inputs-present').length)) {

apps/workbench/app/assets/javascripts/report_issue.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $(document).
   on('click', "#report-issue-submit", function(e){
     $(this).html('Sending');

apps/workbench/app/assets/javascripts/request_shell_access.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $(document).on('ready ajax:success storage', function() {
     // Update the "shell access requested" info box according to the
     // current state of localStorage.

apps/workbench/app/assets/javascripts/select_modal.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $(document).on('click', '.selectable', function() {
     var any;
     var $this = $(this);

apps/workbench/app/assets/javascripts/selection.js.erb

@@ -1,3 +1,7 @@
+<%# Copyright (C) The Arvados Authors. All rights reserved.
+
+SPDX-License-Identifier: AGPL-3.0 %>
+
 //= require jquery
 //= require jquery_ujs
 

apps/workbench/app/assets/javascripts/sizing.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 function graph_zoom(divId, svgId, scale) {
     var pg = document.getElementById(divId);
     vcenter = (pg.scrollTop + (pg.scrollHeight - pg.scrollTopMax)/2.0) / pg.scrollHeight;

apps/workbench/app/assets/javascripts/tab_panes.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // Load tab panes on demand. See app/views/application/_content.html.erb
 
 // Fire when a tab is selected/clicked.

apps/workbench/app/assets/javascripts/upload_to_collection.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 var app = angular.module('Workbench', ['Arvados']);
 app.controller('UploadToCollection', UploadToCollection);
 app.directive('arvUuid', arvUuid);

apps/workbench/app/assets/javascripts/user_agreements.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 function enable_okbutton() {
     var $div = $('#open_user_agreement');
     var allchecked = $('input[name="checked[]"]', $div).not(':checked').length == 0;

apps/workbench/app/assets/javascripts/users.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $(document).
     on('notifications:recount',
        function() {

apps/workbench/app/assets/javascripts/work_unit_component.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $(document).
   on('click', '.component-detail-panel', function(event) {
     var href = $($(event.target).attr('href'));

apps/workbench/app/assets/javascripts/work_unit_log.js

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 $(document).on('arv-log-event', '.arv-log-event-handler-append-logs', function(event, eventData){
     var wasatbottom, txt;
     if (this != event.target) {

apps/workbench/app/assets/stylesheets/api_client_authorizations.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // Place all the styles related to the ApiClientAuthorizations controller here.
 // They will automatically be included in application.css.
 // You can use Sass (SCSS) here: http://sass-lang.com/

apps/workbench/app/assets/stylesheets/application.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 /*
  * This is a manifest file that'll be compiled into application.css, which will include all the files
  * listed below.

apps/workbench/app/assets/stylesheets/authorized_keys.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // Place all the styles related to the AuthorizedKeys controller here.
 // They will automatically be included in application.css.
 // You can use Sass (SCSS) here: http://sass-lang.com/

apps/workbench/app/assets/stylesheets/badges.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 /* Colors
  * Contextual variations of badges
  * Bootstrap 3.0 removed contexts for badges, we re-introduce them, based on what is done for labels

apps/workbench/app/assets/stylesheets/cards.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 .card {
     padding-top: 20px;
     margin: 10px 0 20px 0;

apps/workbench/app/assets/stylesheets/collections.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 /* Style for _show_files tree view. */
 
 ul#collection_files {

apps/workbench/app/assets/stylesheets/groups.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // Place all the styles related to the Groups controller here.
 // They will automatically be included in application.css.
 // You can use Sass (SCSS) here: http://sass-lang.com/

apps/workbench/app/assets/stylesheets/humans.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // Place all the styles related to the Humans controller here.
 // They will automatically be included in application.css.
 // You can use Sass (SCSS) here: http://sass-lang.com/

apps/workbench/app/assets/stylesheets/job_tasks.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // Place all the styles related to the JobTasks controller here.
 // They will automatically be included in application.css.
 // You can use Sass (SCSS) here: http://sass-lang.com/

apps/workbench/app/assets/stylesheets/jobs.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 .arv-job-log-window {
     height: 40em;
     white-space: pre;

apps/workbench/app/assets/stylesheets/keep_disks.css.scss

@@ -1,3 +1,7 @@
+// Copyright (C) The Arvados Authors. All rights reserved.
+//
+// SPDX-License-Identifier: AGPL-3.0
+
 // Place all the styles related to the KeepDisks controller here.
 // They will automatically be included in application.css.
 // You can use Sass (SCSS) here: http://sass-lang.com/