dandiset.yaml

# DO NOT EDIT THIS FILE LOCALLY. ALL LOCAL UPDATES WILL BE LOST.
# It can be edited online at https://dandiarchive.org/dandiset/000108
# and obtained from the dandiarchive.
'@context': https://raw.githubusercontent.com/dandi/schema/master/releases/0.6.0/context.json
about: []
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  status: dandi:OpenAccess
assetsSummary:
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  dataStandard:
  - identifier: RRID:SCR_016124
    name: Brain Imaging Data Structure (BIDS)
    schemaKey: StandardsType
  measurementTechnique: []
  numberOfBytes: 371182156843626
  numberOfFiles: 7976
  numberOfSamples: 147
  numberOfSubjects: 5
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citation: Kamentsky, Lee; Marx, Slayton; Park, Juhyuk; Su-Arcaro, Clover; Moukheiber,
  Mira; Zhao, Victor (2023) Light sheet imaging of the human brain (Version draft)
  [Data set]. DANDI archive. https://doi.org/10.80507/dandi.123456/0.123456.1234
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  name: Kamentsky, Lee
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  email: smarx@mit.edu
  identifier: 0000-0002-8209-0059
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  name: Marx, Slayton
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  email: juhyuk@mit.edu
  identifier: 0000-0002-1429-3399
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  name: Park, Juhyuk
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  email: clover13@mit.edu
  identifier: 0000-0001-5658-5800
  includeInCitation: true
  name: Su-Arcaro, Clover
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  schemaKey: Person
- affiliation: []
  email: miram@mit.edu
  identifier: 0000-0001-8475-6048
  includeInCitation: true
  name: Moukheiber, Mira
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- affiliation: []
  email: viczhao@mit.edu
  identifier: 0000-0001-9694-7132
  includeInCitation: true
  name: Zhao, Victor
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  identifier: https://ror.org/01cwqze88
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  name: NIH
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  url: http://www.nih.gov/
dateCreated: '2021-06-01T14:35:34.166648+00:00'
datePublished: '2023-10-28T07:36:51.554373+00:00'
description: This dataset contains images of 1 mm sections of human brain tissue showing
  nuclei, NeuN+ cells and blood vessels. Each tissue section was first SHIELD-processed
  for protein protection and delipidated to clear the tissue. The tissues were stained
  with YOYO1 (nuclei), anti-NeuN antibody (with Rhodamine Red-X secondary antibody)
  and Lectin (blood vessel) for 8 days in total and then optically cleared using ExPROTOS
  (a refractive matching solution). The sample was imaged using light sheet microscopy
  at a resolution of ~2.5 um x 3.6 um x 2.5 um. Each slab was imaged using multiple
  stacks. Offset transforms are included with the dataset to enable reconstruction
  of each slab.
doi: 10.80507/dandi.123456/0.123456.1234
ethicsApproval: []
id: DANDI:000108/draft
identifier: DANDI:000108
keywords: []
license:
- spdx:CC-BY-4.0
manifestLocation:
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name: Light sheet imaging of the human brain
protocol: []
publishedBy:
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  repository: BICCN dashboard
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  url: https://biccn.github.io/Quarterly_Submission_Receipts/000108-dashboard.html
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  repository: DANDI
  schemaKey: Resource
  url: https://dandiarchive.org/dandiset/000026/draft/files?location=sub-KC001%2F
repository: https://dandiarchive.org
schemaKey: Dandiset
schemaVersion: 0.6.0
studyTarget: []
url: https://dandiarchive.org/dandiset/000108/draft
version: draft
wasGeneratedBy:
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