Code relating to our work with P. mirabilis engineered patterns. See 2022 paper "A deep learning pipeline for segmentation of Proteus mirabilis colony patterns". Authors: Anjali Doshi*, Marian Shaw*, Ruxandra Tonea, Rosalía Minyety, Soonhee Moon, Andrew Laine, Jia Guo^, Tal Danino^. (* & ^ denote equal contribution). Corresponding author: Tal Danino (http://daninolab.nyc/).