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Small bug in create_files_for_hogs.py [Fix] #647

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matrs opened this issue Nov 22, 2021 · 1 comment
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Small bug in create_files_for_hogs.py [Fix] #647

matrs opened this issue Nov 22, 2021 · 1 comment

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@matrs
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matrs commented Nov 22, 2021

The script has a small bug in the line 234, which defines orthofinder_results instead of orthofinder_results_dir, which produces:

AttributeError: 'Namespace' object has no attribute 'orthofinder_results_dir'

So the fix is to change 234:
parser.add_argument("orthofinder_results_dir", help="Input directory containing OrthoFinder results")

Saludos

@davidemms
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Hi

Thanks for reporting this! I've submitted your suggested fix.

Best wishes
David

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