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env.yaml
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env.yaml
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channels:
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=5.1=1_gnu
- bwa=0.7.17=h5bf99c6_8
- ca-certificates=2024.3.11=h06a4308_0
- gdbm=1.18=hd4cb3f1_4
- ld_impl_linux-64=2.38=h1181459_1
- libffi=3.4.4=h6a678d5_1
- libgcc-ng=11.2.0=h1234567_1
- libgomp=11.2.0=h1234567_1
- libstdcxx-ng=11.2.0=h1234567_1
- ncurses=6.4=h6a678d5_0
- openssl=1.1.1w=h7f8727e_0
- perl=5.34.0=h5eee18b_2
- pip=23.3.1=py38h06a4308_0
- python=3.8.18=h7a1cb2a_0
- readline=8.2=h5eee18b_0
- samtools=1.3.1=0
- setuptools=68.2.2=py38h06a4308_0
- sqlite=3.45.3=h5eee18b_0
- tk=8.6.12=h1ccaba5_0
- wheel=0.43.0=py38h06a4308_0
- xz=5.4.6=h5eee18b_1
- zlib=1.2.13=h5eee18b_1
- pip:
- levenshtein==0.25.1
- numpy==1.24.4
- pandas==2.0.3
- pysam==0.22.1
- python-dateutil==2.9.0.post0
- pytz==2024.1
- rapidfuzz==3.9.0
- six==1.16.0
- tzdata==2024.1